Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
H2afb1S4R1E0 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC14.98□□□□□ -0.01
H2afb1S4R1E0 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
H2afb1S4R1E0 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC14.98□□□□□ -0.01
H2afb1S4R1E0 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
H2afb1S4R1E0 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
H2afb1S4R1E0 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
H2afb1S4R1E0 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
H2afb1S4R1E0 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
H2afb1S4R1E0 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
H2afb1S4R1E0 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
H2afb1S4R1E0 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC14.98□□□□□ -0.01
H2afb1S4R1E0 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
H2afb1S4R1E0 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
H2afb1S4R1E0 Gm7712-202ENSMUST00000222331 1510 ntBASIC14.97□□□□□ -0.01
H2afb1S4R1E0 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
H2afb1S4R1E0 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
H2afb1S4R1E0 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
H2afb1S4R1E0 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
H2afb1S4R1E0 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
H2afb1S4R1E0 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
H2afb1S4R1E0 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
H2afb1S4R1E0 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC14.97□□□□□ -0.01
H2afb1S4R1E0 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
H2afb1S4R1E0 Gm12085-201ENSMUST00000119263 940 ntBASIC14.97□□□□□ -0.01
H2afb1S4R1E0 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
H2afb1S4R1E0 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
H2afb1S4R1E0 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
H2afb1S4R1E0 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
H2afb1S4R1E0 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
H2afb1S4R1E0 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
H2afb1S4R1E0 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
H2afb1S4R1E0 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
H2afb1S4R1E0 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
H2afb1S4R1E0 Gm36858-201ENSMUST00000194501 2391 ntBASIC14.97□□□□□ -0.01
H2afb1S4R1E0 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
H2afb1S4R1E0 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
H2afb1S4R1E0 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
H2afb1S4R1E0 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
H2afb1S4R1E0 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
H2afb1S4R1E0 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
H2afb1S4R1E0 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
H2afb1S4R1E0 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
H2afb1S4R1E0 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
H2afb1S4R1E0 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
H2afb1S4R1E0 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
H2afb1S4R1E0 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
H2afb1S4R1E0 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
H2afb1S4R1E0 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
H2afb1S4R1E0 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
H2afb1S4R1E0 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
H2afb1S4R1E0 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC14.96□□□□□ -0.01
H2afb1S4R1E0 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC14.96□□□□□ -0.01
H2afb1S4R1E0 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
H2afb1S4R1E0 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC14.96□□□□□ -0.01
H2afb1S4R1E0 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC14.96□□□□□ -0.01
H2afb1S4R1E0 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
H2afb1S4R1E0 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
H2afb1S4R1E0 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
H2afb1S4R1E0 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC14.96□□□□□ -0.01
H2afb1S4R1E0 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC14.96□□□□□ -0.01
H2afb1S4R1E0 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
H2afb1S4R1E0 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
H2afb1S4R1E0 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
H2afb1S4R1E0 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
H2afb1S4R1E0 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.02
H2afb1S4R1E0 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
H2afb1S4R1E0 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
H2afb1S4R1E0 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
H2afb1S4R1E0 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
H2afb1S4R1E0 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
H2afb1S4R1E0 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
H2afb1S4R1E0 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
H2afb1S4R1E0 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
H2afb1S4R1E0 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
H2afb1S4R1E0 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
H2afb1S4R1E0 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
H2afb1S4R1E0 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
H2afb1S4R1E0 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
H2afb1S4R1E0 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
H2afb1S4R1E0 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
H2afb1S4R1E0 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC14.95□□□□□ -0.02
H2afb1S4R1E0 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
H2afb1S4R1E0 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC14.95□□□□□ -0.02
H2afb1S4R1E0 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC14.95□□□□□ -0.02
H2afb1S4R1E0 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
H2afb1S4R1E0 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
H2afb1S4R1E0 AL590614.2-201ENSMUST00000225374 1937 ntBASIC14.95□□□□□ -0.02
H2afb1S4R1E0 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
H2afb1S4R1E0 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
H2afb1S4R1E0 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
H2afb1S4R1E0 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
H2afb1S4R1E0 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
H2afb1S4R1E0 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
H2afb1S4R1E0 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC14.95□□□□□ -0.02
H2afb1S4R1E0 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
H2afb1S4R1E0 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
H2afb1S4R1E0 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
H2afb1S4R1E0 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
H2afb1S4R1E0 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms