Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Smarcb1Q9Z0H3 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
Smarcb1Q9Z0H3 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Smarcb1Q9Z0H3 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smarcb1Q9Z0H3 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smarcb1Q9Z0H3 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC17.07■□□□□ 0.32
Smarcb1Q9Z0H3 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Smarcb1Q9Z0H3 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
Smarcb1Q9Z0H3 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC17.07■□□□□ 0.32
Smarcb1Q9Z0H3 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC17.07■□□□□ 0.32
Smarcb1Q9Z0H3 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smarcb1Q9Z0H3 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Smarcb1Q9Z0H3 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Smarcb1Q9Z0H3 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Smarcb1Q9Z0H3 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smarcb1Q9Z0H3 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smarcb1Q9Z0H3 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smarcb1Q9Z0H3 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smarcb1Q9Z0H3 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.06■□□□□ 0.32
Smarcb1Q9Z0H3 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smarcb1Q9Z0H3 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smarcb1Q9Z0H3 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smarcb1Q9Z0H3 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smarcb1Q9Z0H3 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Smarcb1Q9Z0H3 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
Smarcb1Q9Z0H3 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smarcb1Q9Z0H3 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Smarcb1Q9Z0H3 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC17.06■□□□□ 0.32
Smarcb1Q9Z0H3 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC17.06■□□□□ 0.32
Smarcb1Q9Z0H3 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC17.06■□□□□ 0.32
Smarcb1Q9Z0H3 AC159301.1-201ENSMUST00000225130 1182 ntBASIC17.06■□□□□ 0.32
Smarcb1Q9Z0H3 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smarcb1Q9Z0H3 Gm7461-201ENSMUST00000058918 827 ntBASIC17.06■□□□□ 0.32
Smarcb1Q9Z0H3 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smarcb1Q9Z0H3 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smarcb1Q9Z0H3 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Smarcb1Q9Z0H3 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smarcb1Q9Z0H3 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smarcb1Q9Z0H3 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smarcb1Q9Z0H3 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Smarcb1Q9Z0H3 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smarcb1Q9Z0H3 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Smarcb1Q9Z0H3 Gm32996-201ENSMUST00000199828 1447 ntBASIC17.05■□□□□ 0.32
Smarcb1Q9Z0H3 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smarcb1Q9Z0H3 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smarcb1Q9Z0H3 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Smarcb1Q9Z0H3 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smarcb1Q9Z0H3 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC17.05■□□□□ 0.32
Smarcb1Q9Z0H3 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smarcb1Q9Z0H3 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smarcb1Q9Z0H3 Gm9889-202ENSMUST00000206983 1577 ntBASIC17.05■□□□□ 0.32
Smarcb1Q9Z0H3 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smarcb1Q9Z0H3 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smarcb1Q9Z0H3 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smarcb1Q9Z0H3 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smarcb1Q9Z0H3 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smarcb1Q9Z0H3 Slc35b2-202ENSMUST00000223987 1766 ntBASIC17.05■□□□□ 0.32
Smarcb1Q9Z0H3 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smarcb1Q9Z0H3 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smarcb1Q9Z0H3 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smarcb1Q9Z0H3 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.04■□□□□ 0.32
Smarcb1Q9Z0H3 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC17.04■□□□□ 0.32
Smarcb1Q9Z0H3 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
Smarcb1Q9Z0H3 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC17.04■□□□□ 0.32
Smarcb1Q9Z0H3 Gm1818-201ENSMUST00000169406 1184 ntBASIC17.04■□□□□ 0.32
Smarcb1Q9Z0H3 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Smarcb1Q9Z0H3 Gm13830-205ENSMUST00000201195 1155 ntBASIC17.04■□□□□ 0.32
Smarcb1Q9Z0H3 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC17.04■□□□□ 0.32
Smarcb1Q9Z0H3 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smarcb1Q9Z0H3 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smarcb1Q9Z0H3 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smarcb1Q9Z0H3 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Smarcb1Q9Z0H3 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Smarcb1Q9Z0H3 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.04■□□□□ 0.32
Smarcb1Q9Z0H3 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smarcb1Q9Z0H3 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smarcb1Q9Z0H3 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smarcb1Q9Z0H3 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smarcb1Q9Z0H3 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smarcb1Q9Z0H3 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smarcb1Q9Z0H3 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smarcb1Q9Z0H3 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.03■□□□□ 0.32
Smarcb1Q9Z0H3 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC17.03■□□□□ 0.32
Smarcb1Q9Z0H3 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC17.03■□□□□ 0.32
Smarcb1Q9Z0H3 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smarcb1Q9Z0H3 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smarcb1Q9Z0H3 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smarcb1Q9Z0H3 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC17.03■□□□□ 0.32
Smarcb1Q9Z0H3 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smarcb1Q9Z0H3 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Smarcb1Q9Z0H3 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Smarcb1Q9Z0H3 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Smarcb1Q9Z0H3 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Smarcb1Q9Z0H3 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.03■□□□□ 0.32
Smarcb1Q9Z0H3 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smarcb1Q9Z0H3 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Smarcb1Q9Z0H3 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smarcb1Q9Z0H3 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Smarcb1Q9Z0H3 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC17.02■□□□□ 0.32
Smarcb1Q9Z0H3 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms