Protein–RNA interactions for Protein: Q9WVK8

Cyp46a1, Cholesterol 24-hydroxylase, mousemouse

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cyp46a1Q9WVK8 Gm22697-201ENSMUST00000175194 63 ntBASIC20.2■□□□□ 0.82
Cyp46a1Q9WVK8 Gm21559-201ENSMUST00000220638 855 ntBASIC20.2■□□□□ 0.82
Cyp46a1Q9WVK8 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC20.2■□□□□ 0.82
Cyp46a1Q9WVK8 Gm8587-201ENSMUST00000076538 843 ntBASIC20.2■□□□□ 0.82
Cyp46a1Q9WVK8 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cyp46a1Q9WVK8 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Cyp46a1Q9WVK8 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cyp46a1Q9WVK8 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Cyp46a1Q9WVK8 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cyp46a1Q9WVK8 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cyp46a1Q9WVK8 Ddx41-204ENSMUST00000224765 2199 ntBASIC20.19■□□□□ 0.82
Cyp46a1Q9WVK8 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC20.19■□□□□ 0.82
Cyp46a1Q9WVK8 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Cyp46a1Q9WVK8 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Cyp46a1Q9WVK8 Gm27389-201ENSMUST00000183622 195 ntBASIC20.19■□□□□ 0.82
Cyp46a1Q9WVK8 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC20.19■□□□□ 0.82
Cyp46a1Q9WVK8 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cyp46a1Q9WVK8 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cyp46a1Q9WVK8 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cyp46a1Q9WVK8 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC20.19■□□□□ 0.82
Cyp46a1Q9WVK8 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cyp46a1Q9WVK8 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cyp46a1Q9WVK8 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Cyp46a1Q9WVK8 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Cyp46a1Q9WVK8 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cyp46a1Q9WVK8 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cyp46a1Q9WVK8 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC20.18■□□□□ 0.82
Cyp46a1Q9WVK8 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cyp46a1Q9WVK8 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Cyp46a1Q9WVK8 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cyp46a1Q9WVK8 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cyp46a1Q9WVK8 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC20.18■□□□□ 0.82
Cyp46a1Q9WVK8 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cyp46a1Q9WVK8 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cyp46a1Q9WVK8 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cyp46a1Q9WVK8 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Cyp46a1Q9WVK8 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cyp46a1Q9WVK8 Slc35b2-202ENSMUST00000223987 1766 ntBASIC20.18■□□□□ 0.82
Cyp46a1Q9WVK8 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cyp46a1Q9WVK8 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cyp46a1Q9WVK8 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cyp46a1Q9WVK8 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cyp46a1Q9WVK8 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cyp46a1Q9WVK8 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cyp46a1Q9WVK8 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cyp46a1Q9WVK8 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Cyp46a1Q9WVK8 Gm45412-201ENSMUST00000210217 2275 ntBASIC20.17■□□□□ 0.82
Cyp46a1Q9WVK8 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Cyp46a1Q9WVK8 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Cyp46a1Q9WVK8 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Cyp46a1Q9WVK8 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Cyp46a1Q9WVK8 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Cyp46a1Q9WVK8 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Cyp46a1Q9WVK8 Gm18032-201ENSMUST00000222541 538 ntBASIC20.17■□□□□ 0.82
Cyp46a1Q9WVK8 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cyp46a1Q9WVK8 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cyp46a1Q9WVK8 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Cyp46a1Q9WVK8 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Cyp46a1Q9WVK8 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Cyp46a1Q9WVK8 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cyp46a1Q9WVK8 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cyp46a1Q9WVK8 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cyp46a1Q9WVK8 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cyp46a1Q9WVK8 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC20.17■□□□□ 0.82
Cyp46a1Q9WVK8 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Cyp46a1Q9WVK8 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC20.17■□□□□ 0.82
Cyp46a1Q9WVK8 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Cyp46a1Q9WVK8 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Cyp46a1Q9WVK8 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cyp46a1Q9WVK8 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cyp46a1Q9WVK8 Gm29707-201ENSMUST00000196325 491 ntBASIC20.16■□□□□ 0.82
Cyp46a1Q9WVK8 Gm18101-201ENSMUST00000215769 548 ntBASIC20.16■□□□□ 0.82
Cyp46a1Q9WVK8 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Cyp46a1Q9WVK8 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Cyp46a1Q9WVK8 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cyp46a1Q9WVK8 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cyp46a1Q9WVK8 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Cyp46a1Q9WVK8 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Cyp46a1Q9WVK8 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cyp46a1Q9WVK8 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
Cyp46a1Q9WVK8 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC20.16■□□□□ 0.82
Cyp46a1Q9WVK8 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC20.16■□□□□ 0.82
Cyp46a1Q9WVK8 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cyp46a1Q9WVK8 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cyp46a1Q9WVK8 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cyp46a1Q9WVK8 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cyp46a1Q9WVK8 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Cyp46a1Q9WVK8 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cyp46a1Q9WVK8 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cyp46a1Q9WVK8 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cyp46a1Q9WVK8 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cyp46a1Q9WVK8 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Cyp46a1Q9WVK8 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cyp46a1Q9WVK8 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC20.15■□□□□ 0.82
Cyp46a1Q9WVK8 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cyp46a1Q9WVK8 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cyp46a1Q9WVK8 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cyp46a1Q9WVK8 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cyp46a1Q9WVK8 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cyp46a1Q9WVK8 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms