Protein–RNA interactions for Protein: Q9WV80

Snx1, Sorting nexin-1, mousemouse

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx1Q9WV80 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Snx1Q9WV80 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Snx1Q9WV80 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC17.12■□□□□ 0.33
Snx1Q9WV80 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC17.12■□□□□ 0.33
Snx1Q9WV80 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Snx1Q9WV80 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Snx1Q9WV80 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Snx1Q9WV80 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Snx1Q9WV80 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
Snx1Q9WV80 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Snx1Q9WV80 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Snx1Q9WV80 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Snx1Q9WV80 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Snx1Q9WV80 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC17.12■□□□□ 0.33
Snx1Q9WV80 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Snx1Q9WV80 AC107711.5-202ENSMUST00000226429 702 ntBASIC17.12■□□□□ 0.33
Snx1Q9WV80 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Snx1Q9WV80 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Snx1Q9WV80 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Snx1Q9WV80 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC17.12■□□□□ 0.33
Snx1Q9WV80 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Snx1Q9WV80 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Snx1Q9WV80 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Snx1Q9WV80 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC17.12■□□□□ 0.33
Snx1Q9WV80 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Snx1Q9WV80 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Snx1Q9WV80 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Snx1Q9WV80 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC17.11■□□□□ 0.33
Snx1Q9WV80 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Snx1Q9WV80 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Snx1Q9WV80 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Snx1Q9WV80 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
Snx1Q9WV80 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Snx1Q9WV80 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Snx1Q9WV80 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Snx1Q9WV80 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Snx1Q9WV80 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.11■□□□□ 0.33
Snx1Q9WV80 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Snx1Q9WV80 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Snx1Q9WV80 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Snx1Q9WV80 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Snx1Q9WV80 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Snx1Q9WV80 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
Snx1Q9WV80 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Snx1Q9WV80 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Snx1Q9WV80 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Snx1Q9WV80 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Snx1Q9WV80 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Snx1Q9WV80 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC17.1■□□□□ 0.33
Snx1Q9WV80 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Snx1Q9WV80 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Snx1Q9WV80 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Snx1Q9WV80 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Snx1Q9WV80 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC17.1■□□□□ 0.33
Snx1Q9WV80 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC17.1■□□□□ 0.33
Snx1Q9WV80 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Snx1Q9WV80 Gm20049-201ENSMUST00000219950 730 ntBASIC17.1■□□□□ 0.33
Snx1Q9WV80 AC164629.5-201ENSMUST00000220387 632 ntBASIC17.1■□□□□ 0.33
Snx1Q9WV80 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC17.1■□□□□ 0.33
Snx1Q9WV80 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC17.1■□□□□ 0.33
Snx1Q9WV80 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC17.1■□□□□ 0.33
Snx1Q9WV80 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Snx1Q9WV80 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Snx1Q9WV80 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Snx1Q9WV80 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Snx1Q9WV80 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Snx1Q9WV80 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Snx1Q9WV80 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Snx1Q9WV80 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Snx1Q9WV80 Wnt10b-206ENSMUST00000228546 2709 ntBASIC17.1■□□□□ 0.33
Snx1Q9WV80 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC17.1■□□□□ 0.33
Snx1Q9WV80 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Snx1Q9WV80 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC17.1■□□□□ 0.33
Snx1Q9WV80 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Snx1Q9WV80 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Snx1Q9WV80 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC17.09■□□□□ 0.33
Snx1Q9WV80 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Snx1Q9WV80 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Snx1Q9WV80 H2-K2-201ENSMUST00000174250 1049 ntBASIC17.09■□□□□ 0.33
Snx1Q9WV80 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC17.09■□□□□ 0.33
Snx1Q9WV80 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Snx1Q9WV80 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Snx1Q9WV80 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Snx1Q9WV80 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC17.09■□□□□ 0.33
Snx1Q9WV80 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Snx1Q9WV80 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Snx1Q9WV80 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Snx1Q9WV80 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC17.09■□□□□ 0.33
Snx1Q9WV80 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Snx1Q9WV80 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Snx1Q9WV80 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Snx1Q9WV80 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Snx1Q9WV80 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Snx1Q9WV80 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Snx1Q9WV80 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Snx1Q9WV80 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.08■□□□□ 0.32
Snx1Q9WV80 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Snx1Q9WV80 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Snx1Q9WV80 Gm17661-201ENSMUST00000170317 270 ntBASIC17.08■□□□□ 0.32
Snx1Q9WV80 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms