Protein–RNA interactions for Protein: Q9WU84

Ccs, Copper chaperone for superoxide dismutase, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcsQ9WU84 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CcsQ9WU84 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
CcsQ9WU84 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CcsQ9WU84 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CcsQ9WU84 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC12.86□□□□□ -0.35
CcsQ9WU84 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CcsQ9WU84 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
CcsQ9WU84 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CcsQ9WU84 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CcsQ9WU84 Gm44878-201ENSMUST00000205812 1295 ntBASIC12.86□□□□□ -0.35
CcsQ9WU84 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CcsQ9WU84 Dio3-201ENSMUST00000097228 1449 ntBASIC12.86□□□□□ -0.35
CcsQ9WU84 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CcsQ9WU84 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CcsQ9WU84 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CcsQ9WU84 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CcsQ9WU84 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CcsQ9WU84 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
CcsQ9WU84 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC12.85□□□□□ -0.35
CcsQ9WU84 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CcsQ9WU84 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CcsQ9WU84 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CcsQ9WU84 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
CcsQ9WU84 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CcsQ9WU84 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CcsQ9WU84 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CcsQ9WU84 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
CcsQ9WU84 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC12.85□□□□□ -0.35
CcsQ9WU84 Gm12896-201ENSMUST00000118430 226 ntBASIC12.85□□□□□ -0.35
CcsQ9WU84 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CcsQ9WU84 AC107452.1-201ENSMUST00000227963 481 ntBASIC12.85□□□□□ -0.35
CcsQ9WU84 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CcsQ9WU84 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CcsQ9WU84 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC12.85□□□□□ -0.35
CcsQ9WU84 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC12.85□□□□□ -0.35
CcsQ9WU84 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CcsQ9WU84 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CcsQ9WU84 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CcsQ9WU84 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CcsQ9WU84 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CcsQ9WU84 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CcsQ9WU84 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
CcsQ9WU84 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CcsQ9WU84 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CcsQ9WU84 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CcsQ9WU84 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
CcsQ9WU84 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CcsQ9WU84 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CcsQ9WU84 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CcsQ9WU84 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CcsQ9WU84 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CcsQ9WU84 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
CcsQ9WU84 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
CcsQ9WU84 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CcsQ9WU84 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CcsQ9WU84 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
CcsQ9WU84 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
CcsQ9WU84 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CcsQ9WU84 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CcsQ9WU84 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CcsQ9WU84 Gm22240-201ENSMUST00000175225 82 ntBASIC12.84□□□□□ -0.35
CcsQ9WU84 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC12.84□□□□□ -0.35
CcsQ9WU84 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
CcsQ9WU84 AC140264.2-202ENSMUST00000218746 817 ntBASIC12.84□□□□□ -0.35
CcsQ9WU84 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
CcsQ9WU84 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CcsQ9WU84 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC12.84□□□□□ -0.35
CcsQ9WU84 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CcsQ9WU84 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
CcsQ9WU84 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CcsQ9WU84 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC12.84□□□□□ -0.35
CcsQ9WU84 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CcsQ9WU84 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC12.84□□□□□ -0.35
CcsQ9WU84 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CcsQ9WU84 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CcsQ9WU84 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
CcsQ9WU84 Gm8839-201ENSMUST00000121279 1645 ntBASIC12.84□□□□□ -0.35
CcsQ9WU84 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CcsQ9WU84 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
CcsQ9WU84 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC12.84□□□□□ -0.35
CcsQ9WU84 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CcsQ9WU84 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CcsQ9WU84 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CcsQ9WU84 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CcsQ9WU84 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
CcsQ9WU84 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
CcsQ9WU84 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
CcsQ9WU84 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
CcsQ9WU84 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
CcsQ9WU84 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC12.83□□□□□ -0.36
CcsQ9WU84 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CcsQ9WU84 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CcsQ9WU84 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC12.83□□□□□ -0.36
CcsQ9WU84 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
CcsQ9WU84 Gm13168-201ENSMUST00000121771 632 ntBASIC12.83□□□□□ -0.36
CcsQ9WU84 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CcsQ9WU84 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CcsQ9WU84 Gm22325-201ENSMUST00000158904 308 ntBASIC12.83□□□□□ -0.36
CcsQ9WU84 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CcsQ9WU84 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms