Protein–RNA interactions for Protein: Q9R1N9

Col13a1, Collagen alpha-1(XIII) chain, mousemouse

Predictions only

Length 751 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col13a1Q9R1N9 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col13a1Q9R1N9 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col13a1Q9R1N9 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Col13a1Q9R1N9 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC14□□□□□ -0.17
Col13a1Q9R1N9 Gm11779-201ENSMUST00000118541 368 ntBASIC14□□□□□ -0.17
Col13a1Q9R1N9 Gm15372-201ENSMUST00000120729 834 ntBASIC14□□□□□ -0.17
Col13a1Q9R1N9 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC14□□□□□ -0.17
Col13a1Q9R1N9 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC14□□□□□ -0.17
Col13a1Q9R1N9 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC14□□□□□ -0.17
Col13a1Q9R1N9 Gm10576-201ENSMUST00000191927 825 ntBASIC14□□□□□ -0.17
Col13a1Q9R1N9 AC160338.1-201ENSMUST00000214232 705 ntBASIC14□□□□□ -0.17
Col13a1Q9R1N9 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col13a1Q9R1N9 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Col13a1Q9R1N9 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Col13a1Q9R1N9 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC14□□□□□ -0.17
Col13a1Q9R1N9 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col13a1Q9R1N9 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col13a1Q9R1N9 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col13a1Q9R1N9 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC14□□□□□ -0.17
Col13a1Q9R1N9 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Col13a1Q9R1N9 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col13a1Q9R1N9 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col13a1Q9R1N9 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC13.99□□□□□ -0.17
Col13a1Q9R1N9 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Col13a1Q9R1N9 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col13a1Q9R1N9 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col13a1Q9R1N9 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col13a1Q9R1N9 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Col13a1Q9R1N9 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col13a1Q9R1N9 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC13.99□□□□□ -0.17
Col13a1Q9R1N9 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col13a1Q9R1N9 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col13a1Q9R1N9 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC13.99□□□□□ -0.17
Col13a1Q9R1N9 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col13a1Q9R1N9 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col13a1Q9R1N9 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Col13a1Q9R1N9 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Col13a1Q9R1N9 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col13a1Q9R1N9 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Col13a1Q9R1N9 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col13a1Q9R1N9 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col13a1Q9R1N9 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col13a1Q9R1N9 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Col13a1Q9R1N9 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC13.98□□□□□ -0.17
Col13a1Q9R1N9 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC13.98□□□□□ -0.17
Col13a1Q9R1N9 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col13a1Q9R1N9 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col13a1Q9R1N9 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Col13a1Q9R1N9 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col13a1Q9R1N9 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col13a1Q9R1N9 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col13a1Q9R1N9 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col13a1Q9R1N9 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Col13a1Q9R1N9 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC13.98□□□□□ -0.17
Col13a1Q9R1N9 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC13.98□□□□□ -0.17
Col13a1Q9R1N9 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col13a1Q9R1N9 Gm12350-201ENSMUST00000121208 462 ntBASIC13.98□□□□□ -0.17
Col13a1Q9R1N9 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col13a1Q9R1N9 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC13.98□□□□□ -0.17
Col13a1Q9R1N9 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Col13a1Q9R1N9 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Col13a1Q9R1N9 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col13a1Q9R1N9 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Col13a1Q9R1N9 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col13a1Q9R1N9 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Col13a1Q9R1N9 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC13.98□□□□□ -0.17
Col13a1Q9R1N9 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col13a1Q9R1N9 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col13a1Q9R1N9 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Col13a1Q9R1N9 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Col13a1Q9R1N9 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col13a1Q9R1N9 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Col13a1Q9R1N9 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
Col13a1Q9R1N9 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
Col13a1Q9R1N9 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col13a1Q9R1N9 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Col13a1Q9R1N9 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col13a1Q9R1N9 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col13a1Q9R1N9 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Col13a1Q9R1N9 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Col13a1Q9R1N9 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col13a1Q9R1N9 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Col13a1Q9R1N9 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col13a1Q9R1N9 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col13a1Q9R1N9 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col13a1Q9R1N9 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Col13a1Q9R1N9 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Col13a1Q9R1N9 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Col13a1Q9R1N9 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC13.97□□□□□ -0.17
Col13a1Q9R1N9 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC13.97□□□□□ -0.17
Col13a1Q9R1N9 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Col13a1Q9R1N9 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col13a1Q9R1N9 CT943659.1-201ENSMUST00000215459 326 ntBASIC13.97□□□□□ -0.17
Col13a1Q9R1N9 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col13a1Q9R1N9 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Col13a1Q9R1N9 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col13a1Q9R1N9 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col13a1Q9R1N9 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col13a1Q9R1N9 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col13a1Q9R1N9 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms