Protein–RNA interactions for Protein: Q9R194

Cry2, Cryptochrome-2, mousemouse

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cry2Q9R194 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cry2Q9R194 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cry2Q9R194 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.73■□□□□ 0.59
Cry2Q9R194 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cry2Q9R194 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cry2Q9R194 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC18.73■□□□□ 0.59
Cry2Q9R194 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cry2Q9R194 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Cry2Q9R194 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Cry2Q9R194 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC18.73■□□□□ 0.59
Cry2Q9R194 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC18.73■□□□□ 0.59
Cry2Q9R194 Gm27646-201ENSMUST00000183989 110 ntBASIC18.73■□□□□ 0.59
Cry2Q9R194 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Cry2Q9R194 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC18.73■□□□□ 0.59
Cry2Q9R194 AC154621.1-201ENSMUST00000226155 1119 ntBASIC18.73■□□□□ 0.59
Cry2Q9R194 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Cry2Q9R194 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cry2Q9R194 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cry2Q9R194 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cry2Q9R194 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Cry2Q9R194 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
Cry2Q9R194 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cry2Q9R194 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC18.73■□□□□ 0.59
Cry2Q9R194 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cry2Q9R194 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cry2Q9R194 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cry2Q9R194 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cry2Q9R194 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Cry2Q9R194 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cry2Q9R194 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Cry2Q9R194 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC18.72■□□□□ 0.59
Cry2Q9R194 Gm18622-201ENSMUST00000219361 595 ntBASIC18.72■□□□□ 0.59
Cry2Q9R194 Ndufaf2-202ENSMUST00000223734 556 ntBASIC18.72■□□□□ 0.59
Cry2Q9R194 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cry2Q9R194 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Cry2Q9R194 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cry2Q9R194 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Cry2Q9R194 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Cry2Q9R194 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cry2Q9R194 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Cry2Q9R194 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Cry2Q9R194 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cry2Q9R194 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cry2Q9R194 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.71■□□□□ 0.59
Cry2Q9R194 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC18.71■□□□□ 0.59
Cry2Q9R194 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cry2Q9R194 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cry2Q9R194 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cry2Q9R194 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cry2Q9R194 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cry2Q9R194 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cry2Q9R194 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.7■□□□□ 0.58
Cry2Q9R194 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cry2Q9R194 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cry2Q9R194 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cry2Q9R194 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cry2Q9R194 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cry2Q9R194 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC18.7■□□□□ 0.58
Cry2Q9R194 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC18.7■□□□□ 0.58
Cry2Q9R194 Gm5682-201ENSMUST00000173402 505 ntBASIC18.7■□□□□ 0.58
Cry2Q9R194 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC18.7■□□□□ 0.58
Cry2Q9R194 Mir8117-201ENSMUST00000184773 107 ntBASIC18.7■□□□□ 0.58
Cry2Q9R194 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cry2Q9R194 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Cry2Q9R194 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cry2Q9R194 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Cry2Q9R194 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cry2Q9R194 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cry2Q9R194 Gm15743-202ENSMUST00000182690 1901 ntBASIC18.69■□□□□ 0.58
Cry2Q9R194 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cry2Q9R194 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cry2Q9R194 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cry2Q9R194 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Cry2Q9R194 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cry2Q9R194 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Cry2Q9R194 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC18.69■□□□□ 0.58
Cry2Q9R194 Gm11873-201ENSMUST00000117877 1304 ntBASIC18.69■□□□□ 0.58
Cry2Q9R194 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC18.68■□□□□ 0.58
Cry2Q9R194 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cry2Q9R194 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Cry2Q9R194 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Cry2Q9R194 Mir3113-201ENSMUST00000175478 76 ntBASIC18.68■□□□□ 0.58
Cry2Q9R194 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC18.68■□□□□ 0.58
Cry2Q9R194 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cry2Q9R194 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC18.68■□□□□ 0.58
Cry2Q9R194 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC18.68■□□□□ 0.58
Cry2Q9R194 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cry2Q9R194 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cry2Q9R194 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC18.68■□□□□ 0.58
Cry2Q9R194 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cry2Q9R194 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cry2Q9R194 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Cry2Q9R194 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Cry2Q9R194 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cry2Q9R194 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Cry2Q9R194 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Cry2Q9R194 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cry2Q9R194 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cry2Q9R194 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cry2Q9R194 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms