Protein–RNA interactions for Protein: Q9QXZ7

Nr2e3, Photoreceptor-specific nuclear receptor, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr2e3Q9QXZ7 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nr2e3Q9QXZ7 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nr2e3Q9QXZ7 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
Nr2e3Q9QXZ7 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nr2e3Q9QXZ7 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Nr2e3Q9QXZ7 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nr2e3Q9QXZ7 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Nr2e3Q9QXZ7 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nr2e3Q9QXZ7 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC18.65■□□□□ 0.58
Nr2e3Q9QXZ7 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Nr2e3Q9QXZ7 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nr2e3Q9QXZ7 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nr2e3Q9QXZ7 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Nr2e3Q9QXZ7 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Nr2e3Q9QXZ7 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nr2e3Q9QXZ7 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Nr2e3Q9QXZ7 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Nr2e3Q9QXZ7 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Nr2e3Q9QXZ7 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Nr2e3Q9QXZ7 Haglr-201ENSMUST00000100000 2085 ntBASIC18.64■□□□□ 0.57
Nr2e3Q9QXZ7 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Nr2e3Q9QXZ7 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Nr2e3Q9QXZ7 AC154471.1-201ENSMUST00000224418 436 ntBASIC18.64■□□□□ 0.57
Nr2e3Q9QXZ7 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nr2e3Q9QXZ7 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC18.64■□□□□ 0.57
Nr2e3Q9QXZ7 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Nr2e3Q9QXZ7 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Nr2e3Q9QXZ7 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nr2e3Q9QXZ7 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nr2e3Q9QXZ7 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nr2e3Q9QXZ7 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Nr2e3Q9QXZ7 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nr2e3Q9QXZ7 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nr2e3Q9QXZ7 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Nr2e3Q9QXZ7 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Nr2e3Q9QXZ7 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nr2e3Q9QXZ7 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Nr2e3Q9QXZ7 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nr2e3Q9QXZ7 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nr2e3Q9QXZ7 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
Nr2e3Q9QXZ7 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Nr2e3Q9QXZ7 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nr2e3Q9QXZ7 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Nr2e3Q9QXZ7 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Nr2e3Q9QXZ7 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Nr2e3Q9QXZ7 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Nr2e3Q9QXZ7 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nr2e3Q9QXZ7 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nr2e3Q9QXZ7 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nr2e3Q9QXZ7 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nr2e3Q9QXZ7 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nr2e3Q9QXZ7 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Nr2e3Q9QXZ7 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nr2e3Q9QXZ7 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Nr2e3Q9QXZ7 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nr2e3Q9QXZ7 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nr2e3Q9QXZ7 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nr2e3Q9QXZ7 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nr2e3Q9QXZ7 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nr2e3Q9QXZ7 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Nr2e3Q9QXZ7 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nr2e3Q9QXZ7 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nr2e3Q9QXZ7 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Nr2e3Q9QXZ7 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nr2e3Q9QXZ7 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
Nr2e3Q9QXZ7 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nr2e3Q9QXZ7 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Nr2e3Q9QXZ7 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Nr2e3Q9QXZ7 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC18.62■□□□□ 0.57
Nr2e3Q9QXZ7 AC159205.3-201ENSMUST00000224614 874 ntBASIC18.62■□□□□ 0.57
Nr2e3Q9QXZ7 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nr2e3Q9QXZ7 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nr2e3Q9QXZ7 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC18.62■□□□□ 0.57
Nr2e3Q9QXZ7 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nr2e3Q9QXZ7 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
Nr2e3Q9QXZ7 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nr2e3Q9QXZ7 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nr2e3Q9QXZ7 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nr2e3Q9QXZ7 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nr2e3Q9QXZ7 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nr2e3Q9QXZ7 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nr2e3Q9QXZ7 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC18.61■□□□□ 0.57
Nr2e3Q9QXZ7 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nr2e3Q9QXZ7 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Nr2e3Q9QXZ7 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nr2e3Q9QXZ7 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nr2e3Q9QXZ7 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC18.61■□□□□ 0.57
Nr2e3Q9QXZ7 Gm33142-201ENSMUST00000193913 867 ntBASIC18.61■□□□□ 0.57
Nr2e3Q9QXZ7 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC18.61■□□□□ 0.57
Nr2e3Q9QXZ7 Gm45328-201ENSMUST00000210942 917 ntBASIC18.61■□□□□ 0.57
Nr2e3Q9QXZ7 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Nr2e3Q9QXZ7 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Nr2e3Q9QXZ7 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nr2e3Q9QXZ7 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nr2e3Q9QXZ7 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Nr2e3Q9QXZ7 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nr2e3Q9QXZ7 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Nr2e3Q9QXZ7 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nr2e3Q9QXZ7 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Nr2e3Q9QXZ7 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms