Protein–RNA interactions for Protein: Q9QWF0

Chaf1a, Chromatin assembly factor 1 subunit A, mousemouse

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1aQ9QWF0 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Chaf1aQ9QWF0 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC18.49■□□□□ 0.55
Chaf1aQ9QWF0 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC18.49■□□□□ 0.55
Chaf1aQ9QWF0 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Chaf1aQ9QWF0 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Chaf1aQ9QWF0 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Chaf1aQ9QWF0 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Chaf1aQ9QWF0 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Chaf1aQ9QWF0 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC18.49■□□□□ 0.55
Chaf1aQ9QWF0 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Chaf1aQ9QWF0 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Chaf1aQ9QWF0 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Chaf1aQ9QWF0 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Chaf1aQ9QWF0 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Chaf1aQ9QWF0 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Chaf1aQ9QWF0 Gm20760-201ENSMUST00000179197 648 ntBASIC18.48■□□□□ 0.55
Chaf1aQ9QWF0 Gm38027-201ENSMUST00000192315 235 ntBASIC18.48■□□□□ 0.55
Chaf1aQ9QWF0 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Chaf1aQ9QWF0 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Chaf1aQ9QWF0 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Chaf1aQ9QWF0 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Chaf1aQ9QWF0 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Chaf1aQ9QWF0 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Chaf1aQ9QWF0 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Chaf1aQ9QWF0 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Chaf1aQ9QWF0 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Chaf1aQ9QWF0 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC18.47■□□□□ 0.55
Chaf1aQ9QWF0 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Chaf1aQ9QWF0 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
Chaf1aQ9QWF0 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Chaf1aQ9QWF0 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Chaf1aQ9QWF0 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Chaf1aQ9QWF0 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Chaf1aQ9QWF0 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Chaf1aQ9QWF0 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Chaf1aQ9QWF0 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Chaf1aQ9QWF0 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Chaf1aQ9QWF0 AC153881.1-201ENSMUST00000214448 284 ntBASIC18.47■□□□□ 0.55
Chaf1aQ9QWF0 Otx2os1-204ENSMUST00000227221 751 ntBASIC18.47■□□□□ 0.55
Chaf1aQ9QWF0 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Chaf1aQ9QWF0 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Chaf1aQ9QWF0 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
Chaf1aQ9QWF0 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Chaf1aQ9QWF0 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Chaf1aQ9QWF0 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Chaf1aQ9QWF0 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Chaf1aQ9QWF0 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Chaf1aQ9QWF0 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC18.47■□□□□ 0.55
Chaf1aQ9QWF0 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Chaf1aQ9QWF0 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Chaf1aQ9QWF0 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Chaf1aQ9QWF0 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Chaf1aQ9QWF0 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Chaf1aQ9QWF0 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC18.46■□□□□ 0.55
Chaf1aQ9QWF0 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Chaf1aQ9QWF0 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Chaf1aQ9QWF0 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Chaf1aQ9QWF0 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC18.46■□□□□ 0.55
Chaf1aQ9QWF0 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Chaf1aQ9QWF0 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC18.46■□□□□ 0.55
Chaf1aQ9QWF0 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC18.46■□□□□ 0.55
Chaf1aQ9QWF0 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Chaf1aQ9QWF0 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Chaf1aQ9QWF0 Gm45203-201ENSMUST00000206384 1831 ntBASIC18.46■□□□□ 0.55
Chaf1aQ9QWF0 Wnt10b-204ENSMUST00000226655 1807 ntBASIC18.46■□□□□ 0.55
Chaf1aQ9QWF0 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Chaf1aQ9QWF0 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Chaf1aQ9QWF0 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Chaf1aQ9QWF0 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
Chaf1aQ9QWF0 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.54
Chaf1aQ9QWF0 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Chaf1aQ9QWF0 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Chaf1aQ9QWF0 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Chaf1aQ9QWF0 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Chaf1aQ9QWF0 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC18.45■□□□□ 0.54
Chaf1aQ9QWF0 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Chaf1aQ9QWF0 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Chaf1aQ9QWF0 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Chaf1aQ9QWF0 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Chaf1aQ9QWF0 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Chaf1aQ9QWF0 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Chaf1aQ9QWF0 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Chaf1aQ9QWF0 Ptprs-211ENSMUST00000223859 5588 ntBASIC18.45■□□□□ 0.54
Chaf1aQ9QWF0 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Chaf1aQ9QWF0 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Chaf1aQ9QWF0 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Chaf1aQ9QWF0 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Chaf1aQ9QWF0 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC18.44■□□□□ 0.54
Chaf1aQ9QWF0 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Chaf1aQ9QWF0 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Chaf1aQ9QWF0 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Chaf1aQ9QWF0 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Chaf1aQ9QWF0 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Chaf1aQ9QWF0 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Chaf1aQ9QWF0 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Chaf1aQ9QWF0 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Chaf1aQ9QWF0 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC18.44■□□□□ 0.54
Chaf1aQ9QWF0 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC18.44■□□□□ 0.54
Chaf1aQ9QWF0 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Chaf1aQ9QWF0 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms