Protein–RNA interactions for Protein: Q9JL61

Rfx5, DNA-binding protein Rfx5, mousemouse

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx5Q9JL61 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rfx5Q9JL61 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rfx5Q9JL61 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Rfx5Q9JL61 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rfx5Q9JL61 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.41■□□□□ 0.38
Rfx5Q9JL61 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rfx5Q9JL61 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rfx5Q9JL61 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.41■□□□□ 0.38
Rfx5Q9JL61 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
Rfx5Q9JL61 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Rfx5Q9JL61 Gm10052-201ENSMUST00000168019 960 ntBASIC17.41■□□□□ 0.38
Rfx5Q9JL61 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rfx5Q9JL61 Ank2-226ENSMUST00000189368 339 ntBASIC17.41■□□□□ 0.38
Rfx5Q9JL61 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rfx5Q9JL61 Gm7729-201ENSMUST00000050143 801 ntBASIC17.41■□□□□ 0.38
Rfx5Q9JL61 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rfx5Q9JL61 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Rfx5Q9JL61 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rfx5Q9JL61 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rfx5Q9JL61 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rfx5Q9JL61 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rfx5Q9JL61 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rfx5Q9JL61 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rfx5Q9JL61 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rfx5Q9JL61 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rfx5Q9JL61 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rfx5Q9JL61 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Rfx5Q9JL61 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC17.4■□□□□ 0.38
Rfx5Q9JL61 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Rfx5Q9JL61 Gm14859-201ENSMUST00000117752 357 ntBASIC17.4■□□□□ 0.38
Rfx5Q9JL61 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rfx5Q9JL61 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rfx5Q9JL61 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC17.4■□□□□ 0.38
Rfx5Q9JL61 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rfx5Q9JL61 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC17.4■□□□□ 0.38
Rfx5Q9JL61 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rfx5Q9JL61 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rfx5Q9JL61 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Rfx5Q9JL61 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rfx5Q9JL61 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rfx5Q9JL61 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rfx5Q9JL61 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC17.4■□□□□ 0.38
Rfx5Q9JL61 Gm9889-202ENSMUST00000206983 1577 ntBASIC17.4■□□□□ 0.38
Rfx5Q9JL61 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rfx5Q9JL61 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rfx5Q9JL61 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rfx5Q9JL61 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rfx5Q9JL61 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rfx5Q9JL61 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Rfx5Q9JL61 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC17.39■□□□□ 0.38
Rfx5Q9JL61 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rfx5Q9JL61 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rfx5Q9JL61 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rfx5Q9JL61 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rfx5Q9JL61 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC17.39■□□□□ 0.37
Rfx5Q9JL61 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rfx5Q9JL61 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
Rfx5Q9JL61 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC17.39■□□□□ 0.37
Rfx5Q9JL61 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rfx5Q9JL61 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Rfx5Q9JL61 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rfx5Q9JL61 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rfx5Q9JL61 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rfx5Q9JL61 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
Rfx5Q9JL61 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rfx5Q9JL61 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rfx5Q9JL61 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Rfx5Q9JL61 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rfx5Q9JL61 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rfx5Q9JL61 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rfx5Q9JL61 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rfx5Q9JL61 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rfx5Q9JL61 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rfx5Q9JL61 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rfx5Q9JL61 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rfx5Q9JL61 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rfx5Q9JL61 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rfx5Q9JL61 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rfx5Q9JL61 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rfx5Q9JL61 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC17.37■□□□□ 0.37
Rfx5Q9JL61 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rfx5Q9JL61 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rfx5Q9JL61 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rfx5Q9JL61 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rfx5Q9JL61 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rfx5Q9JL61 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rfx5Q9JL61 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.37■□□□□ 0.37
Rfx5Q9JL61 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rfx5Q9JL61 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rfx5Q9JL61 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Rfx5Q9JL61 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rfx5Q9JL61 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC17.36■□□□□ 0.37
Rfx5Q9JL61 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rfx5Q9JL61 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rfx5Q9JL61 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rfx5Q9JL61 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rfx5Q9JL61 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rfx5Q9JL61 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rfx5Q9JL61 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Rfx5Q9JL61 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms