Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trem1Q9JKE2 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trem1Q9JKE2 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trem1Q9JKE2 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trem1Q9JKE2 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trem1Q9JKE2 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trem1Q9JKE2 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trem1Q9JKE2 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trem1Q9JKE2 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Trem1Q9JKE2 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trem1Q9JKE2 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC14.85□□□□□ -0.03
Trem1Q9JKE2 Gm13146-201ENSMUST00000118508 780 ntBASIC14.85□□□□□ -0.03
Trem1Q9JKE2 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trem1Q9JKE2 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trem1Q9JKE2 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trem1Q9JKE2 Gm45417-201ENSMUST00000209533 758 ntBASIC14.85□□□□□ -0.03
Trem1Q9JKE2 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trem1Q9JKE2 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trem1Q9JKE2 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Trem1Q9JKE2 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trem1Q9JKE2 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trem1Q9JKE2 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trem1Q9JKE2 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trem1Q9JKE2 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC14.85□□□□□ -0.03
Trem1Q9JKE2 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trem1Q9JKE2 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Trem1Q9JKE2 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trem1Q9JKE2 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trem1Q9JKE2 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trem1Q9JKE2 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trem1Q9JKE2 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trem1Q9JKE2 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Trem1Q9JKE2 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trem1Q9JKE2 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trem1Q9JKE2 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trem1Q9JKE2 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trem1Q9JKE2 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trem1Q9JKE2 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Trem1Q9JKE2 Gm13534-201ENSMUST00000121169 513 ntBASIC14.84□□□□□ -0.03
Trem1Q9JKE2 Gm43060-201ENSMUST00000200621 289 ntBASIC14.84□□□□□ -0.03
Trem1Q9JKE2 AC160393.1-201ENSMUST00000218378 1279 ntBASIC14.84□□□□□ -0.03
Trem1Q9JKE2 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC14.84□□□□□ -0.03
Trem1Q9JKE2 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC14.84□□□□□ -0.03
Trem1Q9JKE2 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trem1Q9JKE2 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trem1Q9JKE2 AC174678.1-201ENSMUST00000228007 2749 ntBASIC14.84□□□□□ -0.03
Trem1Q9JKE2 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC14.84□□□□□ -0.03
Trem1Q9JKE2 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trem1Q9JKE2 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC14.84□□□□□ -0.03
Trem1Q9JKE2 Phf7-203ENSMUST00000226565 1971 ntBASIC14.84□□□□□ -0.03
Trem1Q9JKE2 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trem1Q9JKE2 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trem1Q9JKE2 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trem1Q9JKE2 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trem1Q9JKE2 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trem1Q9JKE2 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trem1Q9JKE2 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trem1Q9JKE2 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trem1Q9JKE2 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trem1Q9JKE2 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trem1Q9JKE2 Gm12821-201ENSMUST00000120022 600 ntBASIC14.83□□□□□ -0.04
Trem1Q9JKE2 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Trem1Q9JKE2 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC14.83□□□□□ -0.04
Trem1Q9JKE2 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trem1Q9JKE2 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trem1Q9JKE2 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trem1Q9JKE2 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trem1Q9JKE2 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trem1Q9JKE2 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trem1Q9JKE2 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
Trem1Q9JKE2 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trem1Q9JKE2 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trem1Q9JKE2 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trem1Q9JKE2 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trem1Q9JKE2 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC14.83□□□□□ -0.04
Trem1Q9JKE2 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trem1Q9JKE2 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trem1Q9JKE2 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC14.82□□□□□ -0.04
Trem1Q9JKE2 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trem1Q9JKE2 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trem1Q9JKE2 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trem1Q9JKE2 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Trem1Q9JKE2 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trem1Q9JKE2 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trem1Q9JKE2 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trem1Q9JKE2 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC14.82□□□□□ -0.04
Trem1Q9JKE2 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC14.82□□□□□ -0.04
Trem1Q9JKE2 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trem1Q9JKE2 Appbp2os-202ENSMUST00000206972 447 ntBASIC14.82□□□□□ -0.04
Trem1Q9JKE2 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trem1Q9JKE2 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trem1Q9JKE2 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trem1Q9JKE2 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trem1Q9JKE2 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trem1Q9JKE2 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trem1Q9JKE2 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trem1Q9JKE2 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trem1Q9JKE2 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trem1Q9JKE2 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trem1Q9JKE2 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms