Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Scn5aQ9JJV9 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Scn5aQ9JJV9 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
Scn5aQ9JJV9 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC16.99■□□□□ 0.31
Scn5aQ9JJV9 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC16.99■□□□□ 0.31
Scn5aQ9JJV9 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Scn5aQ9JJV9 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Scn5aQ9JJV9 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC16.99■□□□□ 0.31
Scn5aQ9JJV9 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Scn5aQ9JJV9 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Scn5aQ9JJV9 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Scn5aQ9JJV9 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Scn5aQ9JJV9 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Scn5aQ9JJV9 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Scn5aQ9JJV9 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Scn5aQ9JJV9 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Scn5aQ9JJV9 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Scn5aQ9JJV9 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Scn5aQ9JJV9 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC16.98■□□□□ 0.31
Scn5aQ9JJV9 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Scn5aQ9JJV9 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Scn5aQ9JJV9 Gm6858-201ENSMUST00000208582 1468 ntBASIC16.98■□□□□ 0.31
Scn5aQ9JJV9 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Scn5aQ9JJV9 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC16.98■□□□□ 0.31
Scn5aQ9JJV9 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC16.98■□□□□ 0.31
Scn5aQ9JJV9 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Scn5aQ9JJV9 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Scn5aQ9JJV9 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Scn5aQ9JJV9 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Scn5aQ9JJV9 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Scn5aQ9JJV9 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Scn5aQ9JJV9 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Scn5aQ9JJV9 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Scn5aQ9JJV9 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Scn5aQ9JJV9 Gm2756-201ENSMUST00000195851 400 ntBASIC16.97■□□□□ 0.31
Scn5aQ9JJV9 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Scn5aQ9JJV9 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Scn5aQ9JJV9 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Scn5aQ9JJV9 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Scn5aQ9JJV9 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Scn5aQ9JJV9 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC16.97■□□□□ 0.31
Scn5aQ9JJV9 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Scn5aQ9JJV9 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC16.97■□□□□ 0.31
Scn5aQ9JJV9 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC16.97■□□□□ 0.31
Scn5aQ9JJV9 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Scn5aQ9JJV9 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Scn5aQ9JJV9 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Scn5aQ9JJV9 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Scn5aQ9JJV9 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Scn5aQ9JJV9 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Scn5aQ9JJV9 Gm5837-201ENSMUST00000191844 1369 ntBASIC16.97■□□□□ 0.31
Scn5aQ9JJV9 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Scn5aQ9JJV9 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Scn5aQ9JJV9 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC16.96■□□□□ 0.31
Scn5aQ9JJV9 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Scn5aQ9JJV9 Gm36967-201ENSMUST00000193814 266 ntBASIC16.96■□□□□ 0.31
Scn5aQ9JJV9 AC154621.1-201ENSMUST00000226155 1119 ntBASIC16.96■□□□□ 0.31
Scn5aQ9JJV9 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC16.96■□□□□ 0.31
Scn5aQ9JJV9 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC16.96■□□□□ 0.31
Scn5aQ9JJV9 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Scn5aQ9JJV9 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Scn5aQ9JJV9 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Scn5aQ9JJV9 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Scn5aQ9JJV9 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Scn5aQ9JJV9 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Scn5aQ9JJV9 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Scn5aQ9JJV9 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Scn5aQ9JJV9 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Scn5aQ9JJV9 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC16.96■□□□□ 0.3
Scn5aQ9JJV9 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC16.96■□□□□ 0.3
Scn5aQ9JJV9 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC16.96■□□□□ 0.3
Scn5aQ9JJV9 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Scn5aQ9JJV9 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Scn5aQ9JJV9 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC16.96■□□□□ 0.3
Scn5aQ9JJV9 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Scn5aQ9JJV9 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Scn5aQ9JJV9 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Scn5aQ9JJV9 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Scn5aQ9JJV9 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Scn5aQ9JJV9 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Scn5aQ9JJV9 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
Scn5aQ9JJV9 Gm37500-201ENSMUST00000192059 1443 ntBASIC16.95■□□□□ 0.3
Scn5aQ9JJV9 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC16.95■□□□□ 0.3
Scn5aQ9JJV9 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Scn5aQ9JJV9 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Scn5aQ9JJV9 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Scn5aQ9JJV9 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC16.95■□□□□ 0.3
Scn5aQ9JJV9 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Scn5aQ9JJV9 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Scn5aQ9JJV9 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Scn5aQ9JJV9 Gm3928-201ENSMUST00000121141 1307 ntBASIC16.95■□□□□ 0.3
Scn5aQ9JJV9 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Scn5aQ9JJV9 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scn5aQ9JJV9 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scn5aQ9JJV9 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scn5aQ9JJV9 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Scn5aQ9JJV9 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scn5aQ9JJV9 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Scn5aQ9JJV9 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
Scn5aQ9JJV9 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms