Protein–RNA interactions for Protein: Q9ESF1

Otof, Otoferlin, mousemouse

Predictions only

Length 1,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OtofQ9ESF1 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
OtofQ9ESF1 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
OtofQ9ESF1 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
OtofQ9ESF1 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
OtofQ9ESF1 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC16.31■□□□□ 0.2
OtofQ9ESF1 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
OtofQ9ESF1 Gm13036-201ENSMUST00000117799 748 ntBASIC16.31■□□□□ 0.2
OtofQ9ESF1 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
OtofQ9ESF1 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC16.31■□□□□ 0.2
OtofQ9ESF1 Gm9449-201ENSMUST00000207265 1011 ntBASIC16.31■□□□□ 0.2
OtofQ9ESF1 Gm10060-201ENSMUST00000212002 111 ntBASIC16.31■□□□□ 0.2
OtofQ9ESF1 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC16.31■□□□□ 0.2
OtofQ9ESF1 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
OtofQ9ESF1 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
OtofQ9ESF1 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
OtofQ9ESF1 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
OtofQ9ESF1 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
OtofQ9ESF1 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
OtofQ9ESF1 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
OtofQ9ESF1 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
OtofQ9ESF1 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
OtofQ9ESF1 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC16.3■□□□□ 0.2
OtofQ9ESF1 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
OtofQ9ESF1 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
OtofQ9ESF1 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
OtofQ9ESF1 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
OtofQ9ESF1 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
OtofQ9ESF1 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
OtofQ9ESF1 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
OtofQ9ESF1 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
OtofQ9ESF1 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
OtofQ9ESF1 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
OtofQ9ESF1 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
OtofQ9ESF1 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC16.3■□□□□ 0.2
OtofQ9ESF1 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
OtofQ9ESF1 Gm8839-201ENSMUST00000121279 1645 ntBASIC16.29■□□□□ 0.2
OtofQ9ESF1 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
OtofQ9ESF1 Gm7230-201ENSMUST00000173026 815 ntBASIC16.29■□□□□ 0.2
OtofQ9ESF1 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
OtofQ9ESF1 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
OtofQ9ESF1 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
OtofQ9ESF1 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.29■□□□□ 0.2
OtofQ9ESF1 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
OtofQ9ESF1 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC16.29■□□□□ 0.2
OtofQ9ESF1 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
OtofQ9ESF1 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
OtofQ9ESF1 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
OtofQ9ESF1 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
OtofQ9ESF1 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
OtofQ9ESF1 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
OtofQ9ESF1 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
OtofQ9ESF1 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
OtofQ9ESF1 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
OtofQ9ESF1 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
OtofQ9ESF1 AC132265.1-201ENSMUST00000219233 1665 ntBASIC16.29■□□□□ 0.2
OtofQ9ESF1 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC16.28■□□□□ 0.2
OtofQ9ESF1 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
OtofQ9ESF1 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
OtofQ9ESF1 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC16.28■□□□□ 0.2
OtofQ9ESF1 Gm6443-201ENSMUST00000203599 874 ntBASIC16.28■□□□□ 0.2
OtofQ9ESF1 Gm18206-201ENSMUST00000207027 926 ntBASIC16.28■□□□□ 0.2
OtofQ9ESF1 Gm18195-201ENSMUST00000207604 706 ntBASIC16.28■□□□□ 0.2
OtofQ9ESF1 Rbfox2-207ENSMUST00000227533 1041 ntBASIC16.28■□□□□ 0.2
OtofQ9ESF1 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
OtofQ9ESF1 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC16.28■□□□□ 0.2
OtofQ9ESF1 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
OtofQ9ESF1 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
OtofQ9ESF1 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
OtofQ9ESF1 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
OtofQ9ESF1 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
OtofQ9ESF1 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
OtofQ9ESF1 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
OtofQ9ESF1 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC16.28■□□□□ 0.2
OtofQ9ESF1 Gm25990-201ENSMUST00000102440 86 ntBASIC16.27■□□□□ 0.2
OtofQ9ESF1 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
OtofQ9ESF1 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC16.27■□□□□ 0.2
OtofQ9ESF1 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
OtofQ9ESF1 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC16.27■□□□□ 0.2
OtofQ9ESF1 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
OtofQ9ESF1 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
OtofQ9ESF1 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
OtofQ9ESF1 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.27■□□□□ 0.19
OtofQ9ESF1 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
OtofQ9ESF1 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC16.27■□□□□ 0.19
OtofQ9ESF1 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC16.27■□□□□ 0.19
OtofQ9ESF1 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.19
OtofQ9ESF1 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
OtofQ9ESF1 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC16.27■□□□□ 0.19
OtofQ9ESF1 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC16.27■□□□□ 0.19
OtofQ9ESF1 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.19
OtofQ9ESF1 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
OtofQ9ESF1 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
OtofQ9ESF1 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
OtofQ9ESF1 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
OtofQ9ESF1 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.27■□□□□ 0.19
OtofQ9ESF1 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
OtofQ9ESF1 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC16.26■□□□□ 0.19
OtofQ9ESF1 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
OtofQ9ESF1 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
OtofQ9ESF1 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms