Protein–RNA interactions for Protein: Q9EQH3

Vps35, Vacuolar protein sorting-associated protein 35, mousemouse

Known RBP Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35Q9EQH3 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Vps35Q9EQH3 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Vps35Q9EQH3 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC16.51■□□□□ 0.23
Vps35Q9EQH3 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC16.51■□□□□ 0.23
Vps35Q9EQH3 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Vps35Q9EQH3 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Vps35Q9EQH3 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Vps35Q9EQH3 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vps35Q9EQH3 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Vps35Q9EQH3 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vps35Q9EQH3 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vps35Q9EQH3 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC16.51■□□□□ 0.23
Vps35Q9EQH3 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Vps35Q9EQH3 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Vps35Q9EQH3 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vps35Q9EQH3 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC16.51■□□□□ 0.23
Vps35Q9EQH3 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Vps35Q9EQH3 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vps35Q9EQH3 Wnt10b-204ENSMUST00000226655 1807 ntBASIC16.51■□□□□ 0.23
Vps35Q9EQH3 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Vps35Q9EQH3 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vps35Q9EQH3 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vps35Q9EQH3 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vps35Q9EQH3 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Vps35Q9EQH3 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vps35Q9EQH3 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vps35Q9EQH3 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Vps35Q9EQH3 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vps35Q9EQH3 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vps35Q9EQH3 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Vps35Q9EQH3 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC16.5■□□□□ 0.23
Vps35Q9EQH3 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vps35Q9EQH3 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Vps35Q9EQH3 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vps35Q9EQH3 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vps35Q9EQH3 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vps35Q9EQH3 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Vps35Q9EQH3 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Vps35Q9EQH3 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vps35Q9EQH3 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Vps35Q9EQH3 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Vps35Q9EQH3 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Vps35Q9EQH3 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC16.5■□□□□ 0.23
Vps35Q9EQH3 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC16.5■□□□□ 0.23
Vps35Q9EQH3 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Vps35Q9EQH3 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Vps35Q9EQH3 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC16.5■□□□□ 0.23
Vps35Q9EQH3 Gm18115-201ENSMUST00000221209 621 ntBASIC16.5■□□□□ 0.23
Vps35Q9EQH3 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Vps35Q9EQH3 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vps35Q9EQH3 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Vps35Q9EQH3 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Vps35Q9EQH3 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vps35Q9EQH3 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Vps35Q9EQH3 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vps35Q9EQH3 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vps35Q9EQH3 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Vps35Q9EQH3 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vps35Q9EQH3 Gm20628-201ENSMUST00000177363 3215 ntBASIC16.5■□□□□ 0.23
Vps35Q9EQH3 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vps35Q9EQH3 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC16.5■□□□□ 0.23
Vps35Q9EQH3 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vps35Q9EQH3 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vps35Q9EQH3 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vps35Q9EQH3 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vps35Q9EQH3 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vps35Q9EQH3 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Vps35Q9EQH3 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vps35Q9EQH3 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Vps35Q9EQH3 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Vps35Q9EQH3 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vps35Q9EQH3 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vps35Q9EQH3 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vps35Q9EQH3 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Vps35Q9EQH3 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC16.49■□□□□ 0.23
Vps35Q9EQH3 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Vps35Q9EQH3 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Vps35Q9EQH3 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vps35Q9EQH3 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vps35Q9EQH3 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Vps35Q9EQH3 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vps35Q9EQH3 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vps35Q9EQH3 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Vps35Q9EQH3 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vps35Q9EQH3 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vps35Q9EQH3 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Vps35Q9EQH3 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Vps35Q9EQH3 Gm36858-201ENSMUST00000194501 2391 ntBASIC16.49■□□□□ 0.23
Vps35Q9EQH3 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Vps35Q9EQH3 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vps35Q9EQH3 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC16.49■□□□□ 0.23
Vps35Q9EQH3 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vps35Q9EQH3 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC16.48■□□□□ 0.23
Vps35Q9EQH3 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vps35Q9EQH3 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vps35Q9EQH3 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vps35Q9EQH3 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vps35Q9EQH3 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Vps35Q9EQH3 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vps35Q9EQH3 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms