Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rrp8Q9DB85 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rrp8Q9DB85 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Rrp8Q9DB85 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rrp8Q9DB85 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rrp8Q9DB85 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Rrp8Q9DB85 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC16.13■□□□□ 0.17
Rrp8Q9DB85 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC16.13■□□□□ 0.17
Rrp8Q9DB85 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC16.13■□□□□ 0.17
Rrp8Q9DB85 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rrp8Q9DB85 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rrp8Q9DB85 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rrp8Q9DB85 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rrp8Q9DB85 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rrp8Q9DB85 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Rrp8Q9DB85 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rrp8Q9DB85 Gm5953-201ENSMUST00000220644 2616 ntBASIC16.13■□□□□ 0.17
Rrp8Q9DB85 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Rrp8Q9DB85 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Rrp8Q9DB85 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rrp8Q9DB85 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rrp8Q9DB85 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rrp8Q9DB85 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rrp8Q9DB85 Gm25745-201ENSMUST00000174945 133 ntBASIC16.12■□□□□ 0.17
Rrp8Q9DB85 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rrp8Q9DB85 Gm8000-201ENSMUST00000188378 592 ntBASIC16.12■□□□□ 0.17
Rrp8Q9DB85 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC16.12■□□□□ 0.17
Rrp8Q9DB85 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC16.12■□□□□ 0.17
Rrp8Q9DB85 Rbfox2-207ENSMUST00000227533 1041 ntBASIC16.12■□□□□ 0.17
Rrp8Q9DB85 AC114585.2-202ENSMUST00000228094 426 ntBASIC16.12■□□□□ 0.17
Rrp8Q9DB85 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rrp8Q9DB85 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rrp8Q9DB85 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC16.12■□□□□ 0.17
Rrp8Q9DB85 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rrp8Q9DB85 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rrp8Q9DB85 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rrp8Q9DB85 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC16.12■□□□□ 0.17
Rrp8Q9DB85 Tfap2a-209ENSMUST00000225180 1828 ntBASIC16.12■□□□□ 0.17
Rrp8Q9DB85 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Rrp8Q9DB85 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rrp8Q9DB85 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rrp8Q9DB85 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC16.12■□□□□ 0.17
Rrp8Q9DB85 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rrp8Q9DB85 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rrp8Q9DB85 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Rrp8Q9DB85 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC16.11■□□□□ 0.17
Rrp8Q9DB85 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rrp8Q9DB85 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rrp8Q9DB85 Gm15442-201ENSMUST00000117905 1527 ntBASIC16.11■□□□□ 0.17
Rrp8Q9DB85 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rrp8Q9DB85 Gm45203-201ENSMUST00000206384 1831 ntBASIC16.11■□□□□ 0.17
Rrp8Q9DB85 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rrp8Q9DB85 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC16.11■□□□□ 0.17
Rrp8Q9DB85 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rrp8Q9DB85 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC16.11■□□□□ 0.17
Rrp8Q9DB85 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rrp8Q9DB85 Gm2213-201ENSMUST00000197485 688 ntBASIC16.11■□□□□ 0.17
Rrp8Q9DB85 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC16.11■□□□□ 0.17
Rrp8Q9DB85 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC16.11■□□□□ 0.17
Rrp8Q9DB85 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rrp8Q9DB85 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rrp8Q9DB85 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rrp8Q9DB85 AL590614.2-201ENSMUST00000225374 1937 ntBASIC16.11■□□□□ 0.17
Rrp8Q9DB85 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rrp8Q9DB85 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rrp8Q9DB85 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC16.11■□□□□ 0.17
Rrp8Q9DB85 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Rrp8Q9DB85 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rrp8Q9DB85 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rrp8Q9DB85 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rrp8Q9DB85 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Rrp8Q9DB85 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rrp8Q9DB85 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rrp8Q9DB85 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Rrp8Q9DB85 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rrp8Q9DB85 Gm12350-201ENSMUST00000121208 462 ntBASIC16.1■□□□□ 0.17
Rrp8Q9DB85 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rrp8Q9DB85 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Rrp8Q9DB85 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC16.1■□□□□ 0.17
Rrp8Q9DB85 Gm8969-201ENSMUST00000199694 526 ntBASIC16.1■□□□□ 0.17
Rrp8Q9DB85 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC16.1■□□□□ 0.17
Rrp8Q9DB85 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rrp8Q9DB85 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Rrp8Q9DB85 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Rrp8Q9DB85 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rrp8Q9DB85 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Rrp8Q9DB85 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rrp8Q9DB85 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rrp8Q9DB85 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rrp8Q9DB85 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rrp8Q9DB85 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Rrp8Q9DB85 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rrp8Q9DB85 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rrp8Q9DB85 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rrp8Q9DB85 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC16.09■□□□□ 0.17
Rrp8Q9DB85 Gm5364-201ENSMUST00000216789 889 ntBASIC16.09■□□□□ 0.17
Rrp8Q9DB85 AC127349.1-201ENSMUST00000224590 266 ntBASIC16.09■□□□□ 0.17
Rrp8Q9DB85 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rrp8Q9DB85 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rrp8Q9DB85 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms