Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chmp2aQ9DB34 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chmp2aQ9DB34 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chmp2aQ9DB34 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Chmp2aQ9DB34 Gfra2-202ENSMUST00000227633 1480 ntBASIC17.23■□□□□ 0.35
Chmp2aQ9DB34 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chmp2aQ9DB34 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC17.23■□□□□ 0.35
Chmp2aQ9DB34 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Chmp2aQ9DB34 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Chmp2aQ9DB34 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chmp2aQ9DB34 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chmp2aQ9DB34 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Chmp2aQ9DB34 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chmp2aQ9DB34 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chmp2aQ9DB34 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chmp2aQ9DB34 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Chmp2aQ9DB34 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC17.22■□□□□ 0.35
Chmp2aQ9DB34 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Chmp2aQ9DB34 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chmp2aQ9DB34 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
Chmp2aQ9DB34 Gm11355-201ENSMUST00000121120 306 ntBASIC17.22■□□□□ 0.35
Chmp2aQ9DB34 AA414768-201ENSMUST00000121924 1257 ntBASIC17.22■□□□□ 0.35
Chmp2aQ9DB34 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Chmp2aQ9DB34 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chmp2aQ9DB34 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chmp2aQ9DB34 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chmp2aQ9DB34 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chmp2aQ9DB34 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Chmp2aQ9DB34 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chmp2aQ9DB34 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chmp2aQ9DB34 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chmp2aQ9DB34 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
Chmp2aQ9DB34 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Chmp2aQ9DB34 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chmp2aQ9DB34 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chmp2aQ9DB34 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chmp2aQ9DB34 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Chmp2aQ9DB34 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chmp2aQ9DB34 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Chmp2aQ9DB34 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chmp2aQ9DB34 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC17.21■□□□□ 0.35
Chmp2aQ9DB34 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chmp2aQ9DB34 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chmp2aQ9DB34 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC17.21■□□□□ 0.35
Chmp2aQ9DB34 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chmp2aQ9DB34 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Chmp2aQ9DB34 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chmp2aQ9DB34 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Chmp2aQ9DB34 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Chmp2aQ9DB34 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Chmp2aQ9DB34 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chmp2aQ9DB34 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chmp2aQ9DB34 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Chmp2aQ9DB34 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chmp2aQ9DB34 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chmp2aQ9DB34 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chmp2aQ9DB34 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chmp2aQ9DB34 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chmp2aQ9DB34 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chmp2aQ9DB34 Gm36858-201ENSMUST00000194501 2391 ntBASIC17.2■□□□□ 0.34
Chmp2aQ9DB34 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chmp2aQ9DB34 Gm37722-201ENSMUST00000193757 208 ntBASIC17.2■□□□□ 0.34
Chmp2aQ9DB34 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Chmp2aQ9DB34 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chmp2aQ9DB34 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC17.2■□□□□ 0.34
Chmp2aQ9DB34 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chmp2aQ9DB34 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Chmp2aQ9DB34 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chmp2aQ9DB34 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chmp2aQ9DB34 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Chmp2aQ9DB34 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Chmp2aQ9DB34 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chmp2aQ9DB34 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chmp2aQ9DB34 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC17.19■□□□□ 0.34
Chmp2aQ9DB34 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Chmp2aQ9DB34 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chmp2aQ9DB34 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC17.19■□□□□ 0.34
Chmp2aQ9DB34 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Chmp2aQ9DB34 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC17.19■□□□□ 0.34
Chmp2aQ9DB34 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chmp2aQ9DB34 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chmp2aQ9DB34 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Chmp2aQ9DB34 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Chmp2aQ9DB34 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chmp2aQ9DB34 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chmp2aQ9DB34 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Chmp2aQ9DB34 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chmp2aQ9DB34 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Chmp2aQ9DB34 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chmp2aQ9DB34 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chmp2aQ9DB34 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chmp2aQ9DB34 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chmp2aQ9DB34 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Chmp2aQ9DB34 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Chmp2aQ9DB34 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Chmp2aQ9DB34 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
Chmp2aQ9DB34 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Chmp2aQ9DB34 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chmp2aQ9DB34 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
Chmp2aQ9DB34 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms