Protein–RNA interactions for Protein: Q9D8P7

Gtf3c6, General transcription factor 3C polypeptide 6, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c6Q9D8P7 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gtf3c6Q9D8P7 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gtf3c6Q9D8P7 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gtf3c6Q9D8P7 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gtf3c6Q9D8P7 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Gtf3c6Q9D8P7 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gtf3c6Q9D8P7 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Gtf3c6Q9D8P7 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gtf3c6Q9D8P7 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gtf3c6Q9D8P7 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gtf3c6Q9D8P7 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Gtf3c6Q9D8P7 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Gtf3c6Q9D8P7 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC17.61■□□□□ 0.41
Gtf3c6Q9D8P7 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gtf3c6Q9D8P7 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gtf3c6Q9D8P7 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gtf3c6Q9D8P7 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Gtf3c6Q9D8P7 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gtf3c6Q9D8P7 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gtf3c6Q9D8P7 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gtf3c6Q9D8P7 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gtf3c6Q9D8P7 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC17.61■□□□□ 0.41
Gtf3c6Q9D8P7 Gm3272-201ENSMUST00000181181 1229 ntBASIC17.61■□□□□ 0.41
Gtf3c6Q9D8P7 Gm18959-201ENSMUST00000208954 655 ntBASIC17.61■□□□□ 0.41
Gtf3c6Q9D8P7 Gm10252-201ENSMUST00000209541 832 ntBASIC17.61■□□□□ 0.41
Gtf3c6Q9D8P7 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC17.61■□□□□ 0.41
Gtf3c6Q9D8P7 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gtf3c6Q9D8P7 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC17.61■□□□□ 0.41
Gtf3c6Q9D8P7 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gtf3c6Q9D8P7 Gm10566-201ENSMUST00000086739 996 ntBASIC17.61■□□□□ 0.41
Gtf3c6Q9D8P7 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gtf3c6Q9D8P7 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gtf3c6Q9D8P7 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gtf3c6Q9D8P7 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Gtf3c6Q9D8P7 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gtf3c6Q9D8P7 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gtf3c6Q9D8P7 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gtf3c6Q9D8P7 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gtf3c6Q9D8P7 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gtf3c6Q9D8P7 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Gtf3c6Q9D8P7 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC17.6■□□□□ 0.41
Gtf3c6Q9D8P7 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gtf3c6Q9D8P7 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Gtf3c6Q9D8P7 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC17.6■□□□□ 0.41
Gtf3c6Q9D8P7 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gtf3c6Q9D8P7 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Gtf3c6Q9D8P7 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Gtf3c6Q9D8P7 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC17.6■□□□□ 0.41
Gtf3c6Q9D8P7 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC17.6■□□□□ 0.41
Gtf3c6Q9D8P7 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Gtf3c6Q9D8P7 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gtf3c6Q9D8P7 Mypopos-202ENSMUST00000205975 2321 ntBASIC17.6■□□□□ 0.41
Gtf3c6Q9D8P7 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gtf3c6Q9D8P7 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gtf3c6Q9D8P7 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gtf3c6Q9D8P7 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gtf3c6Q9D8P7 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC17.59■□□□□ 0.41
Gtf3c6Q9D8P7 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gtf3c6Q9D8P7 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gtf3c6Q9D8P7 Gm18421-201ENSMUST00000204122 625 ntBASIC17.59■□□□□ 0.41
Gtf3c6Q9D8P7 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC17.59■□□□□ 0.41
Gtf3c6Q9D8P7 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gtf3c6Q9D8P7 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC17.59■□□□□ 0.41
Gtf3c6Q9D8P7 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Gtf3c6Q9D8P7 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gtf3c6Q9D8P7 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.41
Gtf3c6Q9D8P7 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC17.58■□□□□ 0.41
Gtf3c6Q9D8P7 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Gtf3c6Q9D8P7 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Gtf3c6Q9D8P7 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Gtf3c6Q9D8P7 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Gtf3c6Q9D8P7 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gtf3c6Q9D8P7 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gtf3c6Q9D8P7 Gm11336-201ENSMUST00000118168 334 ntBASIC17.58■□□□□ 0.4
Gtf3c6Q9D8P7 Gm15565-201ENSMUST00000118890 427 ntBASIC17.58■□□□□ 0.4
Gtf3c6Q9D8P7 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gtf3c6Q9D8P7 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Gtf3c6Q9D8P7 Gm29707-201ENSMUST00000196325 491 ntBASIC17.58■□□□□ 0.4
Gtf3c6Q9D8P7 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gtf3c6Q9D8P7 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gtf3c6Q9D8P7 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Gtf3c6Q9D8P7 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Gtf3c6Q9D8P7 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gtf3c6Q9D8P7 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gtf3c6Q9D8P7 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Gtf3c6Q9D8P7 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gtf3c6Q9D8P7 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Gtf3c6Q9D8P7 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gtf3c6Q9D8P7 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Gtf3c6Q9D8P7 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC17.58■□□□□ 0.4
Gtf3c6Q9D8P7 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gtf3c6Q9D8P7 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gtf3c6Q9D8P7 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Gtf3c6Q9D8P7 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gtf3c6Q9D8P7 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Gtf3c6Q9D8P7 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Gtf3c6Q9D8P7 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gtf3c6Q9D8P7 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gtf3c6Q9D8P7 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
Gtf3c6Q9D8P7 AC115863.1-201ENSMUST00000214815 1813 ntBASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms