Protein–RNA interactions for Protein: Q9D7S9

Chmp5, Charged multivesicular body protein 5, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp5Q9D7S9 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC20.67■□□□□ 0.9
Chmp5Q9D7S9 Il3ra-202ENSMUST00000223589 738 ntBASIC20.67■□□□□ 0.9
Chmp5Q9D7S9 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chmp5Q9D7S9 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chmp5Q9D7S9 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC20.67■□□□□ 0.9
Chmp5Q9D7S9 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chmp5Q9D7S9 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Chmp5Q9D7S9 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Chmp5Q9D7S9 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chmp5Q9D7S9 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Chmp5Q9D7S9 Gm16011-201ENSMUST00000121567 2662 ntBASIC20.66■□□□□ 0.9
Chmp5Q9D7S9 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Chmp5Q9D7S9 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Chmp5Q9D7S9 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Chmp5Q9D7S9 Gm15378-201ENSMUST00000121894 207 ntBASIC20.66■□□□□ 0.9
Chmp5Q9D7S9 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Chmp5Q9D7S9 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Chmp5Q9D7S9 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Chmp5Q9D7S9 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC20.66■□□□□ 0.9
Chmp5Q9D7S9 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Chmp5Q9D7S9 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Chmp5Q9D7S9 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Chmp5Q9D7S9 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Chmp5Q9D7S9 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Chmp5Q9D7S9 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Chmp5Q9D7S9 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Chmp5Q9D7S9 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Chmp5Q9D7S9 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Chmp5Q9D7S9 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Chmp5Q9D7S9 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Chmp5Q9D7S9 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Chmp5Q9D7S9 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Chmp5Q9D7S9 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC20.65■□□□□ 0.9
Chmp5Q9D7S9 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Chmp5Q9D7S9 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Chmp5Q9D7S9 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Chmp5Q9D7S9 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
Chmp5Q9D7S9 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Chmp5Q9D7S9 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC20.65■□□□□ 0.9
Chmp5Q9D7S9 Gm10698-201ENSMUST00000182663 604 ntBASIC20.65■□□□□ 0.9
Chmp5Q9D7S9 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Chmp5Q9D7S9 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC20.65■□□□□ 0.9
Chmp5Q9D7S9 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Chmp5Q9D7S9 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Chmp5Q9D7S9 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Chmp5Q9D7S9 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
Chmp5Q9D7S9 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.9
Chmp5Q9D7S9 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Chmp5Q9D7S9 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC20.64■□□□□ 0.9
Chmp5Q9D7S9 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Chmp5Q9D7S9 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC20.64■□□□□ 0.89
Chmp5Q9D7S9 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Chmp5Q9D7S9 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Chmp5Q9D7S9 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Chmp5Q9D7S9 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Chmp5Q9D7S9 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Chmp5Q9D7S9 Gm38027-201ENSMUST00000192315 235 ntBASIC20.64■□□□□ 0.89
Chmp5Q9D7S9 Gm44878-201ENSMUST00000205812 1295 ntBASIC20.64■□□□□ 0.89
Chmp5Q9D7S9 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Chmp5Q9D7S9 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Chmp5Q9D7S9 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Chmp5Q9D7S9 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Chmp5Q9D7S9 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Chmp5Q9D7S9 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Chmp5Q9D7S9 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Chmp5Q9D7S9 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Chmp5Q9D7S9 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Chmp5Q9D7S9 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Chmp5Q9D7S9 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Chmp5Q9D7S9 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Chmp5Q9D7S9 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Chmp5Q9D7S9 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Chmp5Q9D7S9 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Chmp5Q9D7S9 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Chmp5Q9D7S9 Gm7712-202ENSMUST00000222331 1510 ntBASIC20.63■□□□□ 0.89
Chmp5Q9D7S9 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Chmp5Q9D7S9 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Chmp5Q9D7S9 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Chmp5Q9D7S9 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Chmp5Q9D7S9 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Chmp5Q9D7S9 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC20.63■□□□□ 0.89
Chmp5Q9D7S9 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Chmp5Q9D7S9 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Chmp5Q9D7S9 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Chmp5Q9D7S9 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Chmp5Q9D7S9 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Chmp5Q9D7S9 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Chmp5Q9D7S9 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Chmp5Q9D7S9 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Chmp5Q9D7S9 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Chmp5Q9D7S9 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Chmp5Q9D7S9 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Chmp5Q9D7S9 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Chmp5Q9D7S9 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Chmp5Q9D7S9 Gm5297-201ENSMUST00000198555 1171 ntBASIC20.62■□□□□ 0.89
Chmp5Q9D7S9 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Chmp5Q9D7S9 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Chmp5Q9D7S9 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC20.62■□□□□ 0.89
Chmp5Q9D7S9 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Chmp5Q9D7S9 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms