Protein–RNA interactions for Protein: Q9CYW4

Hdhd3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdhd3Q9CYW4 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hdhd3Q9CYW4 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC13.48□□□□□ -0.25
Hdhd3Q9CYW4 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hdhd3Q9CYW4 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hdhd3Q9CYW4 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hdhd3Q9CYW4 Gm4968-201ENSMUST00000071458 858 ntBASIC13.48□□□□□ -0.25
Hdhd3Q9CYW4 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hdhd3Q9CYW4 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Hdhd3Q9CYW4 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Hdhd3Q9CYW4 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hdhd3Q9CYW4 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hdhd3Q9CYW4 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hdhd3Q9CYW4 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hdhd3Q9CYW4 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hdhd3Q9CYW4 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hdhd3Q9CYW4 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hdhd3Q9CYW4 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC13.48□□□□□ -0.25
Hdhd3Q9CYW4 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC13.48□□□□□ -0.25
Hdhd3Q9CYW4 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hdhd3Q9CYW4 Gm45212-201ENSMUST00000205831 3403 ntBASIC13.48□□□□□ -0.25
Hdhd3Q9CYW4 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Hdhd3Q9CYW4 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hdhd3Q9CYW4 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hdhd3Q9CYW4 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hdhd3Q9CYW4 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC13.47□□□□□ -0.25
Hdhd3Q9CYW4 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hdhd3Q9CYW4 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC13.47□□□□□ -0.25
Hdhd3Q9CYW4 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Hdhd3Q9CYW4 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hdhd3Q9CYW4 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Hdhd3Q9CYW4 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hdhd3Q9CYW4 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hdhd3Q9CYW4 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hdhd3Q9CYW4 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hdhd3Q9CYW4 Alkbh1-212ENSMUST00000185301 408 ntBASIC13.47□□□□□ -0.25
Hdhd3Q9CYW4 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hdhd3Q9CYW4 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Hdhd3Q9CYW4 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Hdhd3Q9CYW4 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hdhd3Q9CYW4 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hdhd3Q9CYW4 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hdhd3Q9CYW4 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hdhd3Q9CYW4 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hdhd3Q9CYW4 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hdhd3Q9CYW4 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hdhd3Q9CYW4 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hdhd3Q9CYW4 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hdhd3Q9CYW4 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC13.47□□□□□ -0.25
Hdhd3Q9CYW4 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hdhd3Q9CYW4 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Hdhd3Q9CYW4 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hdhd3Q9CYW4 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hdhd3Q9CYW4 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hdhd3Q9CYW4 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Hdhd3Q9CYW4 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Hdhd3Q9CYW4 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Hdhd3Q9CYW4 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Hdhd3Q9CYW4 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Hdhd3Q9CYW4 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Hdhd3Q9CYW4 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC13.46□□□□□ -0.25
Hdhd3Q9CYW4 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Hdhd3Q9CYW4 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.25
Hdhd3Q9CYW4 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Hdhd3Q9CYW4 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Hdhd3Q9CYW4 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Hdhd3Q9CYW4 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Hdhd3Q9CYW4 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC13.46□□□□□ -0.25
Hdhd3Q9CYW4 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
Hdhd3Q9CYW4 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Hdhd3Q9CYW4 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC13.46□□□□□ -0.25
Hdhd3Q9CYW4 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Hdhd3Q9CYW4 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Hdhd3Q9CYW4 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC13.46□□□□□ -0.25
Hdhd3Q9CYW4 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Hdhd3Q9CYW4 Gm5408-201ENSMUST00000197998 747 ntBASIC13.46□□□□□ -0.25
Hdhd3Q9CYW4 Gm42569-201ENSMUST00000200539 472 ntBASIC13.46□□□□□ -0.25
Hdhd3Q9CYW4 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Hdhd3Q9CYW4 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Hdhd3Q9CYW4 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Hdhd3Q9CYW4 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Hdhd3Q9CYW4 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Hdhd3Q9CYW4 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Hdhd3Q9CYW4 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Hdhd3Q9CYW4 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Hdhd3Q9CYW4 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Hdhd3Q9CYW4 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
Hdhd3Q9CYW4 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
Hdhd3Q9CYW4 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Hdhd3Q9CYW4 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Hdhd3Q9CYW4 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Hdhd3Q9CYW4 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Hdhd3Q9CYW4 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Hdhd3Q9CYW4 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Hdhd3Q9CYW4 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Hdhd3Q9CYW4 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
Hdhd3Q9CYW4 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC13.45□□□□□ -0.26
Hdhd3Q9CYW4 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC13.45□□□□□ -0.26
Hdhd3Q9CYW4 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC13.45□□□□□ -0.26
Hdhd3Q9CYW4 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC13.45□□□□□ -0.26
Hdhd3Q9CYW4 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms