Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smc3Q9CW03 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smc3Q9CW03 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Smc3Q9CW03 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smc3Q9CW03 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smc3Q9CW03 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smc3Q9CW03 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Smc3Q9CW03 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smc3Q9CW03 AC154855.1-201ENSMUST00000227353 1458 ntBASIC19.41■□□□□ 0.7
Smc3Q9CW03 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smc3Q9CW03 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smc3Q9CW03 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smc3Q9CW03 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smc3Q9CW03 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Smc3Q9CW03 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC19.41■□□□□ 0.7
Smc3Q9CW03 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Smc3Q9CW03 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smc3Q9CW03 Gm8520-201ENSMUST00000186517 868 ntBASIC19.41■□□□□ 0.7
Smc3Q9CW03 Gm3375-201ENSMUST00000203929 796 ntBASIC19.41■□□□□ 0.7
Smc3Q9CW03 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smc3Q9CW03 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smc3Q9CW03 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Smc3Q9CW03 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smc3Q9CW03 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smc3Q9CW03 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smc3Q9CW03 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smc3Q9CW03 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Smc3Q9CW03 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smc3Q9CW03 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
Smc3Q9CW03 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Smc3Q9CW03 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smc3Q9CW03 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC19.4■□□□□ 0.7
Smc3Q9CW03 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smc3Q9CW03 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smc3Q9CW03 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smc3Q9CW03 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Smc3Q9CW03 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smc3Q9CW03 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Smc3Q9CW03 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC19.4■□□□□ 0.7
Smc3Q9CW03 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC19.4■□□□□ 0.7
Smc3Q9CW03 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
Smc3Q9CW03 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smc3Q9CW03 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC19.4■□□□□ 0.7
Smc3Q9CW03 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Smc3Q9CW03 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Smc3Q9CW03 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smc3Q9CW03 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smc3Q9CW03 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smc3Q9CW03 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smc3Q9CW03 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Smc3Q9CW03 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Smc3Q9CW03 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
Smc3Q9CW03 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smc3Q9CW03 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smc3Q9CW03 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smc3Q9CW03 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Smc3Q9CW03 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Smc3Q9CW03 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smc3Q9CW03 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smc3Q9CW03 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smc3Q9CW03 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Smc3Q9CW03 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smc3Q9CW03 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
Smc3Q9CW03 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smc3Q9CW03 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Smc3Q9CW03 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Smc3Q9CW03 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smc3Q9CW03 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smc3Q9CW03 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC19.38■□□□□ 0.69
Smc3Q9CW03 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smc3Q9CW03 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC19.38■□□□□ 0.69
Smc3Q9CW03 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smc3Q9CW03 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC19.38■□□□□ 0.69
Smc3Q9CW03 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Smc3Q9CW03 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC19.38■□□□□ 0.69
Smc3Q9CW03 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC19.38■□□□□ 0.69
Smc3Q9CW03 Arhgef4-208ENSMUST00000211073 171 ntBASIC19.38■□□□□ 0.69
Smc3Q9CW03 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smc3Q9CW03 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smc3Q9CW03 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smc3Q9CW03 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smc3Q9CW03 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smc3Q9CW03 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smc3Q9CW03 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smc3Q9CW03 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smc3Q9CW03 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smc3Q9CW03 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Smc3Q9CW03 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smc3Q9CW03 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smc3Q9CW03 Gfra2-202ENSMUST00000227633 1480 ntBASIC19.37■□□□□ 0.69
Smc3Q9CW03 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC19.37■□□□□ 0.69
Smc3Q9CW03 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smc3Q9CW03 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Smc3Q9CW03 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Smc3Q9CW03 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC19.37■□□□□ 0.69
Smc3Q9CW03 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smc3Q9CW03 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smc3Q9CW03 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smc3Q9CW03 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Smc3Q9CW03 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms