Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
Trim16Q99PP9 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim16Q99PP9 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim16Q99PP9 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim16Q99PP9 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim16Q99PP9 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim16Q99PP9 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim16Q99PP9 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim16Q99PP9 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim16Q99PP9 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trim16Q99PP9 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trim16Q99PP9 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
Trim16Q99PP9 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Trim16Q99PP9 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim16Q99PP9 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim16Q99PP9 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim16Q99PP9 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim16Q99PP9 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC16.15■□□□□ 0.18
Trim16Q99PP9 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC16.15■□□□□ 0.18
Trim16Q99PP9 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trim16Q99PP9 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trim16Q99PP9 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trim16Q99PP9 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.15■□□□□ 0.18
Trim16Q99PP9 AC120002.2-201ENSMUST00000220205 773 ntBASIC16.15■□□□□ 0.18
Trim16Q99PP9 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC16.15■□□□□ 0.18
Trim16Q99PP9 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim16Q99PP9 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Trim16Q99PP9 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Trim16Q99PP9 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim16Q99PP9 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.15■□□□□ 0.18
Trim16Q99PP9 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC16.15■□□□□ 0.18
Trim16Q99PP9 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim16Q99PP9 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC16.15■□□□□ 0.18
Trim16Q99PP9 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim16Q99PP9 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim16Q99PP9 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim16Q99PP9 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Trim16Q99PP9 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.18
Trim16Q99PP9 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Trim16Q99PP9 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Trim16Q99PP9 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trim16Q99PP9 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC16.14■□□□□ 0.17
Trim16Q99PP9 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trim16Q99PP9 Krtap5-1-202ENSMUST00000188274 742 ntBASIC16.14■□□□□ 0.17
Trim16Q99PP9 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC16.14■□□□□ 0.17
Trim16Q99PP9 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim16Q99PP9 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim16Q99PP9 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC16.14■□□□□ 0.17
Trim16Q99PP9 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trim16Q99PP9 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim16Q99PP9 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim16Q99PP9 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim16Q99PP9 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim16Q99PP9 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim16Q99PP9 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim16Q99PP9 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim16Q99PP9 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim16Q99PP9 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trim16Q99PP9 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trim16Q99PP9 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC16.14■□□□□ 0.17
Trim16Q99PP9 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim16Q99PP9 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
Trim16Q99PP9 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim16Q99PP9 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim16Q99PP9 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim16Q99PP9 Gm4217-201ENSMUST00000182243 1002 ntBASIC16.13■□□□□ 0.17
Trim16Q99PP9 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
Trim16Q99PP9 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim16Q99PP9 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trim16Q99PP9 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trim16Q99PP9 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim16Q99PP9 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim16Q99PP9 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim16Q99PP9 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trim16Q99PP9 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim16Q99PP9 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim16Q99PP9 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim16Q99PP9 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim16Q99PP9 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim16Q99PP9 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim16Q99PP9 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim16Q99PP9 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim16Q99PP9 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim16Q99PP9 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim16Q99PP9 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trim16Q99PP9 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim16Q99PP9 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trim16Q99PP9 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim16Q99PP9 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim16Q99PP9 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Trim16Q99PP9 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Trim16Q99PP9 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC16.12■□□□□ 0.17
Trim16Q99PP9 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim16Q99PP9 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Trim16Q99PP9 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trim16Q99PP9 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim16Q99PP9 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim16Q99PP9 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trim16Q99PP9 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Trim16Q99PP9 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms