Protein–RNA interactions for Protein: Q99PE5

Smim3, Small integral membrane protein 3, mousemouse

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim3Q99PE5 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Smim3Q99PE5 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC14.14□□□□□ -0.15
Smim3Q99PE5 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Smim3Q99PE5 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
Smim3Q99PE5 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Smim3Q99PE5 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smim3Q99PE5 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
Smim3Q99PE5 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smim3Q99PE5 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smim3Q99PE5 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Smim3Q99PE5 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smim3Q99PE5 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smim3Q99PE5 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smim3Q99PE5 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smim3Q99PE5 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Smim3Q99PE5 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Smim3Q99PE5 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smim3Q99PE5 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
Smim3Q99PE5 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Smim3Q99PE5 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC14.14□□□□□ -0.15
Smim3Q99PE5 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC14.14□□□□□ -0.15
Smim3Q99PE5 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC14.14□□□□□ -0.15
Smim3Q99PE5 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smim3Q99PE5 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smim3Q99PE5 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Smim3Q99PE5 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smim3Q99PE5 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smim3Q99PE5 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smim3Q99PE5 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Smim3Q99PE5 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smim3Q99PE5 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Smim3Q99PE5 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smim3Q99PE5 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Smim3Q99PE5 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC14.13□□□□□ -0.15
Smim3Q99PE5 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smim3Q99PE5 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC14.13□□□□□ -0.15
Smim3Q99PE5 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Smim3Q99PE5 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smim3Q99PE5 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Smim3Q99PE5 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smim3Q99PE5 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smim3Q99PE5 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smim3Q99PE5 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Smim3Q99PE5 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smim3Q99PE5 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Smim3Q99PE5 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smim3Q99PE5 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smim3Q99PE5 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Smim3Q99PE5 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smim3Q99PE5 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smim3Q99PE5 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smim3Q99PE5 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smim3Q99PE5 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smim3Q99PE5 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smim3Q99PE5 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smim3Q99PE5 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Smim3Q99PE5 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smim3Q99PE5 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Smim3Q99PE5 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Smim3Q99PE5 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smim3Q99PE5 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smim3Q99PE5 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Smim3Q99PE5 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Smim3Q99PE5 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smim3Q99PE5 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.12□□□□□ -0.15
Smim3Q99PE5 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Smim3Q99PE5 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Smim3Q99PE5 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smim3Q99PE5 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smim3Q99PE5 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Smim3Q99PE5 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC14.12□□□□□ -0.15
Smim3Q99PE5 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Smim3Q99PE5 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smim3Q99PE5 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smim3Q99PE5 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.11□□□□□ -0.15
Smim3Q99PE5 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smim3Q99PE5 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Smim3Q99PE5 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC14.11□□□□□ -0.15
Smim3Q99PE5 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smim3Q99PE5 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC14.11□□□□□ -0.15
Smim3Q99PE5 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Smim3Q99PE5 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smim3Q99PE5 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smim3Q99PE5 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC14.11□□□□□ -0.15
Smim3Q99PE5 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Smim3Q99PE5 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Smim3Q99PE5 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smim3Q99PE5 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Smim3Q99PE5 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smim3Q99PE5 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smim3Q99PE5 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smim3Q99PE5 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Smim3Q99PE5 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Smim3Q99PE5 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smim3Q99PE5 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smim3Q99PE5 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smim3Q99PE5 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smim3Q99PE5 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smim3Q99PE5 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smim3Q99PE5 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms