Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tlr3Q99MB1 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tlr3Q99MB1 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tlr3Q99MB1 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Tlr3Q99MB1 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Tlr3Q99MB1 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Tlr3Q99MB1 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
Tlr3Q99MB1 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tlr3Q99MB1 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Tlr3Q99MB1 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
Tlr3Q99MB1 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Tlr3Q99MB1 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Tlr3Q99MB1 Gm9103-201ENSMUST00000119371 405 ntBASIC17.71■□□□□ 0.43
Tlr3Q99MB1 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC17.71■□□□□ 0.43
Tlr3Q99MB1 Gm21559-201ENSMUST00000220638 855 ntBASIC17.71■□□□□ 0.43
Tlr3Q99MB1 Gm8587-201ENSMUST00000076538 843 ntBASIC17.71■□□□□ 0.43
Tlr3Q99MB1 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Tlr3Q99MB1 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tlr3Q99MB1 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Tlr3Q99MB1 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Tlr3Q99MB1 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tlr3Q99MB1 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Tlr3Q99MB1 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Tlr3Q99MB1 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Tlr3Q99MB1 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Tlr3Q99MB1 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tlr3Q99MB1 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Tlr3Q99MB1 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.7■□□□□ 0.42
Tlr3Q99MB1 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tlr3Q99MB1 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tlr3Q99MB1 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Tlr3Q99MB1 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tlr3Q99MB1 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tlr3Q99MB1 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Tlr3Q99MB1 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tlr3Q99MB1 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Tlr3Q99MB1 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tlr3Q99MB1 Gm18421-201ENSMUST00000204122 625 ntBASIC17.7■□□□□ 0.42
Tlr3Q99MB1 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC17.7■□□□□ 0.42
Tlr3Q99MB1 AC122351.1-201ENSMUST00000220467 126 ntBASIC17.7■□□□□ 0.42
Tlr3Q99MB1 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tlr3Q99MB1 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Tlr3Q99MB1 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Tlr3Q99MB1 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tlr3Q99MB1 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tlr3Q99MB1 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tlr3Q99MB1 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tlr3Q99MB1 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Tlr3Q99MB1 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC17.69■□□□□ 0.42
Tlr3Q99MB1 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tlr3Q99MB1 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC17.69■□□□□ 0.42
Tlr3Q99MB1 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
Tlr3Q99MB1 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Tlr3Q99MB1 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Tlr3Q99MB1 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC17.69■□□□□ 0.42
Tlr3Q99MB1 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Tlr3Q99MB1 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tlr3Q99MB1 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tlr3Q99MB1 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Tlr3Q99MB1 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tlr3Q99MB1 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
Tlr3Q99MB1 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Tlr3Q99MB1 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tlr3Q99MB1 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC17.69■□□□□ 0.42
Tlr3Q99MB1 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tlr3Q99MB1 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tlr3Q99MB1 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tlr3Q99MB1 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tlr3Q99MB1 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tlr3Q99MB1 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Tlr3Q99MB1 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Tlr3Q99MB1 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tlr3Q99MB1 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
Tlr3Q99MB1 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tlr3Q99MB1 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC17.68■□□□□ 0.42
Tlr3Q99MB1 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Tlr3Q99MB1 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Tlr3Q99MB1 Gm29707-201ENSMUST00000196325 491 ntBASIC17.68■□□□□ 0.42
Tlr3Q99MB1 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC17.68■□□□□ 0.42
Tlr3Q99MB1 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tlr3Q99MB1 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tlr3Q99MB1 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Tlr3Q99MB1 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tlr3Q99MB1 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tlr3Q99MB1 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tlr3Q99MB1 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tlr3Q99MB1 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tlr3Q99MB1 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tlr3Q99MB1 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tlr3Q99MB1 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC17.67■□□□□ 0.42
Tlr3Q99MB1 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tlr3Q99MB1 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tlr3Q99MB1 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.67■□□□□ 0.42
Tlr3Q99MB1 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Tlr3Q99MB1 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.67■□□□□ 0.42
Tlr3Q99MB1 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Tlr3Q99MB1 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Tlr3Q99MB1 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC17.67■□□□□ 0.42
Tlr3Q99MB1 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tlr3Q99MB1 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms