Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Scrt1Q99M85 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Scrt1Q99M85 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC14.44□□□□□ -0.1
Scrt1Q99M85 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scrt1Q99M85 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Scrt1Q99M85 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scrt1Q99M85 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scrt1Q99M85 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC14.44□□□□□ -0.1
Scrt1Q99M85 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scrt1Q99M85 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scrt1Q99M85 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scrt1Q99M85 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scrt1Q99M85 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scrt1Q99M85 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scrt1Q99M85 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC14.43□□□□□ -0.1
Scrt1Q99M85 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC14.43□□□□□ -0.1
Scrt1Q99M85 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scrt1Q99M85 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC14.43□□□□□ -0.1
Scrt1Q99M85 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scrt1Q99M85 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Scrt1Q99M85 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scrt1Q99M85 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scrt1Q99M85 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scrt1Q99M85 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scrt1Q99M85 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scrt1Q99M85 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC14.43□□□□□ -0.1
Scrt1Q99M85 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Scrt1Q99M85 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Scrt1Q99M85 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC14.43□□□□□ -0.1
Scrt1Q99M85 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scrt1Q99M85 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Scrt1Q99M85 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Scrt1Q99M85 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC14.43□□□□□ -0.1
Scrt1Q99M85 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Scrt1Q99M85 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scrt1Q99M85 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scrt1Q99M85 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Scrt1Q99M85 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scrt1Q99M85 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC14.43□□□□□ -0.1
Scrt1Q99M85 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC14.42□□□□□ -0.1
Scrt1Q99M85 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scrt1Q99M85 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scrt1Q99M85 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Scrt1Q99M85 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC14.42□□□□□ -0.1
Scrt1Q99M85 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scrt1Q99M85 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scrt1Q99M85 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Scrt1Q99M85 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scrt1Q99M85 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC14.42□□□□□ -0.1
Scrt1Q99M85 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scrt1Q99M85 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC14.42□□□□□ -0.1
Scrt1Q99M85 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Scrt1Q99M85 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC14.42□□□□□ -0.1
Scrt1Q99M85 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scrt1Q99M85 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scrt1Q99M85 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scrt1Q99M85 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scrt1Q99M85 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC14.42□□□□□ -0.1
Scrt1Q99M85 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scrt1Q99M85 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Scrt1Q99M85 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scrt1Q99M85 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scrt1Q99M85 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scrt1Q99M85 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Scrt1Q99M85 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scrt1Q99M85 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scrt1Q99M85 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scrt1Q99M85 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scrt1Q99M85 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC14.41□□□□□ -0.1
Scrt1Q99M85 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scrt1Q99M85 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scrt1Q99M85 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Scrt1Q99M85 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC14.41□□□□□ -0.1
Scrt1Q99M85 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Scrt1Q99M85 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC14.41□□□□□ -0.1
Scrt1Q99M85 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC14.41□□□□□ -0.1
Scrt1Q99M85 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Scrt1Q99M85 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC14.41□□□□□ -0.1
Scrt1Q99M85 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scrt1Q99M85 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scrt1Q99M85 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Scrt1Q99M85 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scrt1Q99M85 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scrt1Q99M85 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Scrt1Q99M85 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scrt1Q99M85 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scrt1Q99M85 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scrt1Q99M85 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Scrt1Q99M85 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scrt1Q99M85 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scrt1Q99M85 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scrt1Q99M85 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scrt1Q99M85 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scrt1Q99M85 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Scrt1Q99M85 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC14.4□□□□□ -0.1
Scrt1Q99M85 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Scrt1Q99M85 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scrt1Q99M85 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scrt1Q99M85 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scrt1Q99M85 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms