Protein–RNA interactions for Protein: Q99M51

Nck1, Cytoplasmic protein NCK1, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nck1Q99M51 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nck1Q99M51 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Nck1Q99M51 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nck1Q99M51 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nck1Q99M51 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Nck1Q99M51 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nck1Q99M51 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Nck1Q99M51 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC15.79■□□□□ 0.12
Nck1Q99M51 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nck1Q99M51 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC15.79■□□□□ 0.12
Nck1Q99M51 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nck1Q99M51 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nck1Q99M51 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nck1Q99M51 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nck1Q99M51 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nck1Q99M51 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nck1Q99M51 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nck1Q99M51 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Nck1Q99M51 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nck1Q99M51 Gm45203-201ENSMUST00000206384 1831 ntBASIC15.78■□□□□ 0.12
Nck1Q99M51 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nck1Q99M51 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Nck1Q99M51 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nck1Q99M51 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nck1Q99M51 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Nck1Q99M51 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Nck1Q99M51 Gm27275-201ENSMUST00000184318 272 ntBASIC15.78■□□□□ 0.12
Nck1Q99M51 Gm3807-201ENSMUST00000193520 1168 ntBASIC15.78■□□□□ 0.12
Nck1Q99M51 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC15.78■□□□□ 0.12
Nck1Q99M51 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nck1Q99M51 Gm43072-201ENSMUST00000200283 1671 ntBASIC15.78■□□□□ 0.12
Nck1Q99M51 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Nck1Q99M51 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nck1Q99M51 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nck1Q99M51 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nck1Q99M51 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nck1Q99M51 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
Nck1Q99M51 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nck1Q99M51 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nck1Q99M51 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nck1Q99M51 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nck1Q99M51 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nck1Q99M51 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nck1Q99M51 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Nck1Q99M51 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Nck1Q99M51 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC15.77■□□□□ 0.12
Nck1Q99M51 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC15.77■□□□□ 0.12
Nck1Q99M51 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Nck1Q99M51 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Nck1Q99M51 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Nck1Q99M51 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC15.77■□□□□ 0.12
Nck1Q99M51 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC15.77■□□□□ 0.12
Nck1Q99M51 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Nck1Q99M51 Gm17661-201ENSMUST00000170317 270 ntBASIC15.77■□□□□ 0.12
Nck1Q99M51 Gm27000-201ENSMUST00000182943 842 ntBASIC15.77■□□□□ 0.12
Nck1Q99M51 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Nck1Q99M51 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Nck1Q99M51 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Nck1Q99M51 Gm19430-201ENSMUST00000193847 2137 ntBASIC15.77■□□□□ 0.11
Nck1Q99M51 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
Nck1Q99M51 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Nck1Q99M51 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Nck1Q99M51 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Nck1Q99M51 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
Nck1Q99M51 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
Nck1Q99M51 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Nck1Q99M51 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Nck1Q99M51 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Nck1Q99M51 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC15.76■□□□□ 0.11
Nck1Q99M51 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Nck1Q99M51 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Nck1Q99M51 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Nck1Q99M51 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Nck1Q99M51 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Nck1Q99M51 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Nck1Q99M51 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Nck1Q99M51 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC15.76■□□□□ 0.11
Nck1Q99M51 Gm12933-201ENSMUST00000120203 872 ntBASIC15.76■□□□□ 0.11
Nck1Q99M51 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Nck1Q99M51 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Nck1Q99M51 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Nck1Q99M51 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Nck1Q99M51 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Nck1Q99M51 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Nck1Q99M51 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Nck1Q99M51 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Nck1Q99M51 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Nck1Q99M51 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Nck1Q99M51 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Nck1Q99M51 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Nck1Q99M51 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nck1Q99M51 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nck1Q99M51 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
Nck1Q99M51 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Nck1Q99M51 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nck1Q99M51 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Nck1Q99M51 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nck1Q99M51 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Nck1Q99M51 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC15.75■□□□□ 0.11
Nck1Q99M51 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC15.75■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms