Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col20a1Q923P0 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
Col20a1Q923P0 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col20a1Q923P0 Gm13884-201ENSMUST00000118103 829 ntBASIC19.44■□□□□ 0.7
Col20a1Q923P0 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col20a1Q923P0 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC19.44■□□□□ 0.7
Col20a1Q923P0 Gm5864-201ENSMUST00000202263 970 ntBASIC19.44■□□□□ 0.7
Col20a1Q923P0 Mzt1-203ENSMUST00000227948 952 ntBASIC19.44■□□□□ 0.7
Col20a1Q923P0 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col20a1Q923P0 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col20a1Q923P0 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col20a1Q923P0 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col20a1Q923P0 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col20a1Q923P0 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col20a1Q923P0 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Col20a1Q923P0 Cmtm5-203ENSMUST00000227441 610 ntBASIC19.43■□□□□ 0.7
Col20a1Q923P0 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC19.43■□□□□ 0.7
Col20a1Q923P0 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col20a1Q923P0 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Col20a1Q923P0 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Col20a1Q923P0 Gm11841-201ENSMUST00000117060 1963 ntBASIC19.43■□□□□ 0.7
Col20a1Q923P0 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col20a1Q923P0 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Col20a1Q923P0 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Col20a1Q923P0 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Col20a1Q923P0 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Col20a1Q923P0 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Col20a1Q923P0 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Col20a1Q923P0 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Col20a1Q923P0 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Col20a1Q923P0 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC19.42■□□□□ 0.7
Col20a1Q923P0 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
Col20a1Q923P0 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Col20a1Q923P0 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Col20a1Q923P0 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Col20a1Q923P0 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Col20a1Q923P0 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Col20a1Q923P0 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Col20a1Q923P0 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC19.41■□□□□ 0.7
Col20a1Q923P0 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Col20a1Q923P0 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Col20a1Q923P0 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
Col20a1Q923P0 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Col20a1Q923P0 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Col20a1Q923P0 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Col20a1Q923P0 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Col20a1Q923P0 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Col20a1Q923P0 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Col20a1Q923P0 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Col20a1Q923P0 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Col20a1Q923P0 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Col20a1Q923P0 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Col20a1Q923P0 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC19.41■□□□□ 0.7
Col20a1Q923P0 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Col20a1Q923P0 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Col20a1Q923P0 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Col20a1Q923P0 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Col20a1Q923P0 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Col20a1Q923P0 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Col20a1Q923P0 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Col20a1Q923P0 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC19.4■□□□□ 0.7
Col20a1Q923P0 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Col20a1Q923P0 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
Col20a1Q923P0 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC19.4■□□□□ 0.7
Col20a1Q923P0 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC19.4■□□□□ 0.7
Col20a1Q923P0 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC19.4■□□□□ 0.7
Col20a1Q923P0 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Col20a1Q923P0 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Col20a1Q923P0 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC19.4■□□□□ 0.7
Col20a1Q923P0 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Col20a1Q923P0 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Col20a1Q923P0 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Col20a1Q923P0 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Col20a1Q923P0 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Col20a1Q923P0 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Col20a1Q923P0 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC19.39■□□□□ 0.7
Col20a1Q923P0 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
Col20a1Q923P0 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC19.39■□□□□ 0.69
Col20a1Q923P0 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Col20a1Q923P0 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Col20a1Q923P0 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Col20a1Q923P0 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Col20a1Q923P0 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Col20a1Q923P0 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC19.39■□□□□ 0.69
Col20a1Q923P0 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Col20a1Q923P0 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Col20a1Q923P0 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Col20a1Q923P0 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Col20a1Q923P0 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Col20a1Q923P0 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Col20a1Q923P0 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Col20a1Q923P0 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Col20a1Q923P0 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Col20a1Q923P0 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Col20a1Q923P0 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Col20a1Q923P0 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Col20a1Q923P0 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Col20a1Q923P0 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Col20a1Q923P0 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Col20a1Q923P0 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC19.38■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms