Protein–RNA interactions for Protein: Q91XZ8

Pcdhb22, Protocadherin beta 22, mousemouse

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb22Q91XZ8 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC19.26■□□□□ 0.67
Pcdhb22Q91XZ8 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC19.26■□□□□ 0.67
Pcdhb22Q91XZ8 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Pcdhb22Q91XZ8 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhb22Q91XZ8 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhb22Q91XZ8 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhb22Q91XZ8 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhb22Q91XZ8 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC19.26■□□□□ 0.67
Pcdhb22Q91XZ8 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhb22Q91XZ8 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhb22Q91XZ8 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhb22Q91XZ8 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhb22Q91XZ8 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhb22Q91XZ8 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhb22Q91XZ8 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
Pcdhb22Q91XZ8 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhb22Q91XZ8 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhb22Q91XZ8 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhb22Q91XZ8 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhb22Q91XZ8 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhb22Q91XZ8 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
Pcdhb22Q91XZ8 Gm45328-201ENSMUST00000210942 917 ntBASIC19.25■□□□□ 0.67
Pcdhb22Q91XZ8 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhb22Q91XZ8 AC130671.1-201ENSMUST00000227384 1237 ntBASIC19.25■□□□□ 0.67
Pcdhb22Q91XZ8 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhb22Q91XZ8 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhb22Q91XZ8 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
Pcdhb22Q91XZ8 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Pcdhb22Q91XZ8 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhb22Q91XZ8 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhb22Q91XZ8 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhb22Q91XZ8 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhb22Q91XZ8 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhb22Q91XZ8 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhb22Q91XZ8 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhb22Q91XZ8 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhb22Q91XZ8 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhb22Q91XZ8 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhb22Q91XZ8 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhb22Q91XZ8 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhb22Q91XZ8 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhb22Q91XZ8 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Pcdhb22Q91XZ8 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhb22Q91XZ8 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhb22Q91XZ8 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhb22Q91XZ8 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhb22Q91XZ8 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhb22Q91XZ8 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhb22Q91XZ8 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhb22Q91XZ8 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhb22Q91XZ8 Gm44487-201ENSMUST00000205145 325 ntBASIC19.24■□□□□ 0.67
Pcdhb22Q91XZ8 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhb22Q91XZ8 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhb22Q91XZ8 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhb22Q91XZ8 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhb22Q91XZ8 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhb22Q91XZ8 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhb22Q91XZ8 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhb22Q91XZ8 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Pcdhb22Q91XZ8 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhb22Q91XZ8 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhb22Q91XZ8 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhb22Q91XZ8 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhb22Q91XZ8 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Pcdhb22Q91XZ8 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhb22Q91XZ8 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Pcdhb22Q91XZ8 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhb22Q91XZ8 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhb22Q91XZ8 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC19.23■□□□□ 0.67
Pcdhb22Q91XZ8 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhb22Q91XZ8 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhb22Q91XZ8 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Pcdhb22Q91XZ8 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhb22Q91XZ8 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhb22Q91XZ8 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhb22Q91XZ8 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhb22Q91XZ8 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhb22Q91XZ8 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhb22Q91XZ8 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhb22Q91XZ8 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Pcdhb22Q91XZ8 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC19.22■□□□□ 0.67
Pcdhb22Q91XZ8 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhb22Q91XZ8 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhb22Q91XZ8 AC125350.1-201ENSMUST00000225115 903 ntBASIC19.22■□□□□ 0.67
Pcdhb22Q91XZ8 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhb22Q91XZ8 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Pcdhb22Q91XZ8 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhb22Q91XZ8 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhb22Q91XZ8 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhb22Q91XZ8 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
Pcdhb22Q91XZ8 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhb22Q91XZ8 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhb22Q91XZ8 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhb22Q91XZ8 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
Pcdhb22Q91XZ8 Gm10052-201ENSMUST00000168019 960 ntBASIC19.21■□□□□ 0.67
Pcdhb22Q91XZ8 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC19.21■□□□□ 0.67
Pcdhb22Q91XZ8 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC19.21■□□□□ 0.67
Pcdhb22Q91XZ8 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Pcdhb22Q91XZ8 Gm7729-201ENSMUST00000050143 801 ntBASIC19.21■□□□□ 0.67
Pcdhb22Q91XZ8 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms