Protein–RNA interactions for Protein: Q91XW9

Pcdhgc5, MCG133388, isoform CRA_f, mousemouse

Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc5Q91XW9 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhgc5Q91XW9 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhgc5Q91XW9 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhgc5Q91XW9 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC18.76■□□□□ 0.59
Pcdhgc5Q91XW9 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhgc5Q91XW9 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Pcdhgc5Q91XW9 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhgc5Q91XW9 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhgc5Q91XW9 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhgc5Q91XW9 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhgc5Q91XW9 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhgc5Q91XW9 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhgc5Q91XW9 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhgc5Q91XW9 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC18.75■□□□□ 0.59
Pcdhgc5Q91XW9 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Pcdhgc5Q91XW9 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhgc5Q91XW9 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhgc5Q91XW9 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhgc5Q91XW9 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhgc5Q91XW9 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhgc5Q91XW9 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhgc5Q91XW9 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhgc5Q91XW9 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhgc5Q91XW9 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhgc5Q91XW9 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhgc5Q91XW9 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhgc5Q91XW9 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhgc5Q91XW9 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhgc5Q91XW9 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhgc5Q91XW9 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhgc5Q91XW9 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhgc5Q91XW9 Gm19721-201ENSMUST00000195284 1764 ntBASIC18.74■□□□□ 0.59
Pcdhgc5Q91XW9 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhgc5Q91XW9 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhgc5Q91XW9 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhgc5Q91XW9 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC18.74■□□□□ 0.59
Pcdhgc5Q91XW9 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC18.74■□□□□ 0.59
Pcdhgc5Q91XW9 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
Pcdhgc5Q91XW9 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.74■□□□□ 0.59
Pcdhgc5Q91XW9 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhgc5Q91XW9 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Pcdhgc5Q91XW9 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhgc5Q91XW9 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhgc5Q91XW9 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhgc5Q91XW9 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhgc5Q91XW9 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhgc5Q91XW9 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhgc5Q91XW9 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhgc5Q91XW9 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhgc5Q91XW9 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Pcdhgc5Q91XW9 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhgc5Q91XW9 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhgc5Q91XW9 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC18.73■□□□□ 0.59
Pcdhgc5Q91XW9 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC18.73■□□□□ 0.59
Pcdhgc5Q91XW9 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC18.73■□□□□ 0.59
Pcdhgc5Q91XW9 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhgc5Q91XW9 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhgc5Q91XW9 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhgc5Q91XW9 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhgc5Q91XW9 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhgc5Q91XW9 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhgc5Q91XW9 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhgc5Q91XW9 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhgc5Q91XW9 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhgc5Q91XW9 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhgc5Q91XW9 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhgc5Q91XW9 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhgc5Q91XW9 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhgc5Q91XW9 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhgc5Q91XW9 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
Pcdhgc5Q91XW9 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhgc5Q91XW9 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhgc5Q91XW9 Gm10052-201ENSMUST00000168019 960 ntBASIC18.72■□□□□ 0.59
Pcdhgc5Q91XW9 Gm18733-201ENSMUST00000173950 856 ntBASIC18.72■□□□□ 0.59
Pcdhgc5Q91XW9 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Pcdhgc5Q91XW9 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC18.72■□□□□ 0.59
Pcdhgc5Q91XW9 AC153889.1-201ENSMUST00000219257 330 ntBASIC18.72■□□□□ 0.59
Pcdhgc5Q91XW9 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhgc5Q91XW9 Gm7729-201ENSMUST00000050143 801 ntBASIC18.72■□□□□ 0.59
Pcdhgc5Q91XW9 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhgc5Q91XW9 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhgc5Q91XW9 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhgc5Q91XW9 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhgc5Q91XW9 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhgc5Q91XW9 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhgc5Q91XW9 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhgc5Q91XW9 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC18.71■□□□□ 0.59
Pcdhgc5Q91XW9 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhgc5Q91XW9 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhgc5Q91XW9 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhgc5Q91XW9 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Pcdhgc5Q91XW9 Gm11336-201ENSMUST00000118168 334 ntBASIC18.71■□□□□ 0.59
Pcdhgc5Q91XW9 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhgc5Q91XW9 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Pcdhgc5Q91XW9 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC18.71■□□□□ 0.59
Pcdhgc5Q91XW9 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC18.71■□□□□ 0.59
Pcdhgc5Q91XW9 AC159301.1-201ENSMUST00000225130 1182 ntBASIC18.71■□□□□ 0.59
Pcdhgc5Q91XW9 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhgc5Q91XW9 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhgc5Q91XW9 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC18.71■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms