Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ddx41Q91VN6 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ddx41Q91VN6 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ddx41Q91VN6 Gm13216-201ENSMUST00000117145 591 ntBASIC18.91■□□□□ 0.62
Ddx41Q91VN6 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC18.91■□□□□ 0.62
Ddx41Q91VN6 Gm28033-201ENSMUST00000184224 96 ntBASIC18.91■□□□□ 0.62
Ddx41Q91VN6 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Ddx41Q91VN6 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ddx41Q91VN6 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ddx41Q91VN6 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ddx41Q91VN6 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Ddx41Q91VN6 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ddx41Q91VN6 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ddx41Q91VN6 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ddx41Q91VN6 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC18.9■□□□□ 0.62
Ddx41Q91VN6 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Ddx41Q91VN6 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ddx41Q91VN6 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ddx41Q91VN6 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ddx41Q91VN6 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC18.9■□□□□ 0.62
Ddx41Q91VN6 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC18.9■□□□□ 0.62
Ddx41Q91VN6 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Ddx41Q91VN6 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Ddx41Q91VN6 AC122351.1-201ENSMUST00000220467 126 ntBASIC18.9■□□□□ 0.62
Ddx41Q91VN6 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC18.9■□□□□ 0.62
Ddx41Q91VN6 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ddx41Q91VN6 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ddx41Q91VN6 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ddx41Q91VN6 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ddx41Q91VN6 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Ddx41Q91VN6 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ddx41Q91VN6 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ddx41Q91VN6 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ddx41Q91VN6 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Ddx41Q91VN6 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ddx41Q91VN6 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Ddx41Q91VN6 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Ddx41Q91VN6 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Ddx41Q91VN6 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Ddx41Q91VN6 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ddx41Q91VN6 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ddx41Q91VN6 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ddx41Q91VN6 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ddx41Q91VN6 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Ddx41Q91VN6 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ddx41Q91VN6 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC18.89■□□□□ 0.61
Ddx41Q91VN6 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC18.89■□□□□ 0.61
Ddx41Q91VN6 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ddx41Q91VN6 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ddx41Q91VN6 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ddx41Q91VN6 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ddx41Q91VN6 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Ddx41Q91VN6 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ddx41Q91VN6 Gm16401-202ENSMUST00000197463 2074 ntBASIC18.89■□□□□ 0.61
Ddx41Q91VN6 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ddx41Q91VN6 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ddx41Q91VN6 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Ddx41Q91VN6 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ddx41Q91VN6 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ddx41Q91VN6 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Ddx41Q91VN6 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Ddx41Q91VN6 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC18.88■□□□□ 0.61
Ddx41Q91VN6 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ddx41Q91VN6 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ddx41Q91VN6 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ddx41Q91VN6 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ddx41Q91VN6 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC18.88■□□□□ 0.61
Ddx41Q91VN6 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC18.88■□□□□ 0.61
Ddx41Q91VN6 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC18.88■□□□□ 0.61
Ddx41Q91VN6 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC18.88■□□□□ 0.61
Ddx41Q91VN6 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ddx41Q91VN6 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Ddx41Q91VN6 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ddx41Q91VN6 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ddx41Q91VN6 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ddx41Q91VN6 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ddx41Q91VN6 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ddx41Q91VN6 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ddx41Q91VN6 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ddx41Q91VN6 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ddx41Q91VN6 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ddx41Q91VN6 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ddx41Q91VN6 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Ddx41Q91VN6 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Ddx41Q91VN6 Gm17971-201ENSMUST00000190239 806 ntBASIC18.87■□□□□ 0.61
Ddx41Q91VN6 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ddx41Q91VN6 Otx2os1-206ENSMUST00000228153 787 ntBASIC18.87■□□□□ 0.61
Ddx41Q91VN6 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ddx41Q91VN6 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ddx41Q91VN6 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ddx41Q91VN6 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ddx41Q91VN6 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Ddx41Q91VN6 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Ddx41Q91VN6 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ddx41Q91VN6 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ddx41Q91VN6 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ddx41Q91VN6 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ddx41Q91VN6 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ddx41Q91VN6 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ddx41Q91VN6 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms