Protein–RNA interactions for Protein: Q8VHI7

Ccdc65, Coiled-coil domain-containing protein 65, mousemouse

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc65Q8VHI7 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc65Q8VHI7 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc65Q8VHI7 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc65Q8VHI7 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
Ccdc65Q8VHI7 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc65Q8VHI7 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc65Q8VHI7 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc65Q8VHI7 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc65Q8VHI7 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc65Q8VHI7 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc65Q8VHI7 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC17.43■□□□□ 0.38
Ccdc65Q8VHI7 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc65Q8VHI7 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc65Q8VHI7 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Ccdc65Q8VHI7 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Ccdc65Q8VHI7 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc65Q8VHI7 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc65Q8VHI7 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc65Q8VHI7 Gm6433-201ENSMUST00000118634 875 ntBASIC17.42■□□□□ 0.38
Ccdc65Q8VHI7 Mir5130-201ENSMUST00000175160 84 ntBASIC17.42■□□□□ 0.38
Ccdc65Q8VHI7 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC17.42■□□□□ 0.38
Ccdc65Q8VHI7 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC17.42■□□□□ 0.38
Ccdc65Q8VHI7 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc65Q8VHI7 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc65Q8VHI7 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Ccdc65Q8VHI7 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc65Q8VHI7 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc65Q8VHI7 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc65Q8VHI7 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc65Q8VHI7 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc65Q8VHI7 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc65Q8VHI7 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Ccdc65Q8VHI7 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc65Q8VHI7 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc65Q8VHI7 Spsb2-203ENSMUST00000112473 1322 ntBASIC17.42■□□□□ 0.38
Ccdc65Q8VHI7 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc65Q8VHI7 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc65Q8VHI7 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc65Q8VHI7 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc65Q8VHI7 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc65Q8VHI7 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc65Q8VHI7 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc65Q8VHI7 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc65Q8VHI7 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc65Q8VHI7 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc65Q8VHI7 Gm8668-201ENSMUST00000120559 1447 ntBASIC17.41■□□□□ 0.38
Ccdc65Q8VHI7 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc65Q8VHI7 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC17.41■□□□□ 0.38
Ccdc65Q8VHI7 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC17.41■□□□□ 0.38
Ccdc65Q8VHI7 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc65Q8VHI7 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Ccdc65Q8VHI7 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc65Q8VHI7 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc65Q8VHI7 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc65Q8VHI7 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Ccdc65Q8VHI7 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc65Q8VHI7 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc65Q8VHI7 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc65Q8VHI7 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Ccdc65Q8VHI7 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Ccdc65Q8VHI7 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC17.41■□□□□ 0.38
Ccdc65Q8VHI7 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc65Q8VHI7 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc65Q8VHI7 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc65Q8VHI7 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc65Q8VHI7 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc65Q8VHI7 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc65Q8VHI7 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc65Q8VHI7 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Ccdc65Q8VHI7 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc65Q8VHI7 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC17.4■□□□□ 0.38
Ccdc65Q8VHI7 Krtap5-1-202ENSMUST00000188274 742 ntBASIC17.4■□□□□ 0.38
Ccdc65Q8VHI7 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC17.4■□□□□ 0.38
Ccdc65Q8VHI7 Gm45058-201ENSMUST00000205810 766 ntBASIC17.4■□□□□ 0.38
Ccdc65Q8VHI7 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc65Q8VHI7 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Ccdc65Q8VHI7 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc65Q8VHI7 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc65Q8VHI7 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc65Q8VHI7 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc65Q8VHI7 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC17.4■□□□□ 0.38
Ccdc65Q8VHI7 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC17.4■□□□□ 0.38
Ccdc65Q8VHI7 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc65Q8VHI7 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc65Q8VHI7 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Ccdc65Q8VHI7 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc65Q8VHI7 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Ccdc65Q8VHI7 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Ccdc65Q8VHI7 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC17.4■□□□□ 0.38
Ccdc65Q8VHI7 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc65Q8VHI7 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc65Q8VHI7 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc65Q8VHI7 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc65Q8VHI7 Gm8839-201ENSMUST00000121279 1645 ntBASIC17.39■□□□□ 0.38
Ccdc65Q8VHI7 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Ccdc65Q8VHI7 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Ccdc65Q8VHI7 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc65Q8VHI7 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc65Q8VHI7 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc65Q8VHI7 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms