Protein–RNA interactions for Protein: Q8VEE1

Lmcd1, LIM and cysteine-rich domains protein 1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmcd1Q8VEE1 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lmcd1Q8VEE1 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.54■□□□□ 0.4
Lmcd1Q8VEE1 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.54■□□□□ 0.4
Lmcd1Q8VEE1 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lmcd1Q8VEE1 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lmcd1Q8VEE1 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
Lmcd1Q8VEE1 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.54■□□□□ 0.4
Lmcd1Q8VEE1 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.54■□□□□ 0.4
Lmcd1Q8VEE1 Gm7507-201ENSMUST00000183053 1008 ntBASIC17.54■□□□□ 0.4
Lmcd1Q8VEE1 Gm43438-201ENSMUST00000198133 379 ntBASIC17.54■□□□□ 0.4
Lmcd1Q8VEE1 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC17.54■□□□□ 0.4
Lmcd1Q8VEE1 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lmcd1Q8VEE1 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lmcd1Q8VEE1 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lmcd1Q8VEE1 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lmcd1Q8VEE1 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lmcd1Q8VEE1 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lmcd1Q8VEE1 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lmcd1Q8VEE1 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Lmcd1Q8VEE1 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lmcd1Q8VEE1 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lmcd1Q8VEE1 Gm11873-201ENSMUST00000117877 1304 ntBASIC17.53■□□□□ 0.4
Lmcd1Q8VEE1 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lmcd1Q8VEE1 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lmcd1Q8VEE1 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
Lmcd1Q8VEE1 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lmcd1Q8VEE1 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lmcd1Q8VEE1 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lmcd1Q8VEE1 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.53■□□□□ 0.4
Lmcd1Q8VEE1 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Lmcd1Q8VEE1 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Lmcd1Q8VEE1 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lmcd1Q8VEE1 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lmcd1Q8VEE1 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lmcd1Q8VEE1 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lmcd1Q8VEE1 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lmcd1Q8VEE1 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lmcd1Q8VEE1 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lmcd1Q8VEE1 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Lmcd1Q8VEE1 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Lmcd1Q8VEE1 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC17.52■□□□□ 0.4
Lmcd1Q8VEE1 Gm11764-201ENSMUST00000120221 623 ntBASIC17.52■□□□□ 0.4
Lmcd1Q8VEE1 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lmcd1Q8VEE1 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lmcd1Q8VEE1 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC17.52■□□□□ 0.4
Lmcd1Q8VEE1 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Lmcd1Q8VEE1 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.51■□□□□ 0.39
Lmcd1Q8VEE1 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lmcd1Q8VEE1 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Lmcd1Q8VEE1 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lmcd1Q8VEE1 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lmcd1Q8VEE1 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Lmcd1Q8VEE1 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lmcd1Q8VEE1 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC17.51■□□□□ 0.39
Lmcd1Q8VEE1 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Lmcd1Q8VEE1 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC17.51■□□□□ 0.39
Lmcd1Q8VEE1 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC17.51■□□□□ 0.39
Lmcd1Q8VEE1 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC17.51■□□□□ 0.39
Lmcd1Q8VEE1 Gm9172-201ENSMUST00000212092 954 ntBASIC17.51■□□□□ 0.39
Lmcd1Q8VEE1 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC17.51■□□□□ 0.39
Lmcd1Q8VEE1 AC139382.1-201ENSMUST00000221402 498 ntBASIC17.51■□□□□ 0.39
Lmcd1Q8VEE1 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Lmcd1Q8VEE1 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.51■□□□□ 0.39
Lmcd1Q8VEE1 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lmcd1Q8VEE1 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lmcd1Q8VEE1 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Lmcd1Q8VEE1 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Lmcd1Q8VEE1 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lmcd1Q8VEE1 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Lmcd1Q8VEE1 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Lmcd1Q8VEE1 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Lmcd1Q8VEE1 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lmcd1Q8VEE1 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Lmcd1Q8VEE1 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lmcd1Q8VEE1 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lmcd1Q8VEE1 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lmcd1Q8VEE1 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Lmcd1Q8VEE1 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Lmcd1Q8VEE1 Gm44945-201ENSMUST00000206764 1187 ntBASIC17.5■□□□□ 0.39
Lmcd1Q8VEE1 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC17.5■□□□□ 0.39
Lmcd1Q8VEE1 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lmcd1Q8VEE1 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lmcd1Q8VEE1 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lmcd1Q8VEE1 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
Lmcd1Q8VEE1 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Lmcd1Q8VEE1 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lmcd1Q8VEE1 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
Lmcd1Q8VEE1 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.5■□□□□ 0.39
Lmcd1Q8VEE1 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lmcd1Q8VEE1 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lmcd1Q8VEE1 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lmcd1Q8VEE1 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lmcd1Q8VEE1 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lmcd1Q8VEE1 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lmcd1Q8VEE1 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Lmcd1Q8VEE1 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lmcd1Q8VEE1 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lmcd1Q8VEE1 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lmcd1Q8VEE1 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lmcd1Q8VEE1 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms