Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lsm1Q8VC85 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lsm1Q8VC85 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC15.82■□□□□ 0.12
Lsm1Q8VC85 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Lsm1Q8VC85 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lsm1Q8VC85 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lsm1Q8VC85 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lsm1Q8VC85 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lsm1Q8VC85 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Lsm1Q8VC85 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC15.81■□□□□ 0.12
Lsm1Q8VC85 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Lsm1Q8VC85 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC15.81■□□□□ 0.12
Lsm1Q8VC85 Gm22240-201ENSMUST00000175225 82 ntBASIC15.81■□□□□ 0.12
Lsm1Q8VC85 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lsm1Q8VC85 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC15.81■□□□□ 0.12
Lsm1Q8VC85 AC135963.1-201ENSMUST00000211640 717 ntBASIC15.81■□□□□ 0.12
Lsm1Q8VC85 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC15.81■□□□□ 0.12
Lsm1Q8VC85 Arhgef33-211ENSMUST00000225658 473 ntBASIC15.81■□□□□ 0.12
Lsm1Q8VC85 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lsm1Q8VC85 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lsm1Q8VC85 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Lsm1Q8VC85 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lsm1Q8VC85 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Lsm1Q8VC85 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC15.81■□□□□ 0.12
Lsm1Q8VC85 Gm10812-201ENSMUST00000099864 546 ntBASIC15.81■□□□□ 0.12
Lsm1Q8VC85 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lsm1Q8VC85 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Lsm1Q8VC85 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lsm1Q8VC85 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lsm1Q8VC85 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lsm1Q8VC85 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lsm1Q8VC85 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Lsm1Q8VC85 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Lsm1Q8VC85 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lsm1Q8VC85 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC15.8■□□□□ 0.12
Lsm1Q8VC85 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC15.8■□□□□ 0.12
Lsm1Q8VC85 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lsm1Q8VC85 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Lsm1Q8VC85 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lsm1Q8VC85 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Lsm1Q8VC85 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC15.8■□□□□ 0.12
Lsm1Q8VC85 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC15.8■□□□□ 0.12
Lsm1Q8VC85 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC15.8■□□□□ 0.12
Lsm1Q8VC85 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC15.8■□□□□ 0.12
Lsm1Q8VC85 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lsm1Q8VC85 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lsm1Q8VC85 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Lsm1Q8VC85 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Lsm1Q8VC85 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Lsm1Q8VC85 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC15.8■□□□□ 0.12
Lsm1Q8VC85 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lsm1Q8VC85 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Lsm1Q8VC85 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC15.79■□□□□ 0.12
Lsm1Q8VC85 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Lsm1Q8VC85 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Lsm1Q8VC85 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Lsm1Q8VC85 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Lsm1Q8VC85 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
Lsm1Q8VC85 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Lsm1Q8VC85 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Lsm1Q8VC85 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Lsm1Q8VC85 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Lsm1Q8VC85 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Lsm1Q8VC85 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Lsm1Q8VC85 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Lsm1Q8VC85 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Lsm1Q8VC85 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Lsm1Q8VC85 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Lsm1Q8VC85 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Lsm1Q8VC85 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC15.79■□□□□ 0.12
Lsm1Q8VC85 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Lsm1Q8VC85 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC15.79■□□□□ 0.12
Lsm1Q8VC85 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC15.79■□□□□ 0.12
Lsm1Q8VC85 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Lsm1Q8VC85 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC15.79■□□□□ 0.12
Lsm1Q8VC85 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC15.79■□□□□ 0.12
Lsm1Q8VC85 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC15.79■□□□□ 0.12
Lsm1Q8VC85 Gm7370-201ENSMUST00000219471 767 ntBASIC15.79■□□□□ 0.12
Lsm1Q8VC85 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Lsm1Q8VC85 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Lsm1Q8VC85 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Lsm1Q8VC85 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Lsm1Q8VC85 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Lsm1Q8VC85 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC15.79■□□□□ 0.12
Lsm1Q8VC85 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Lsm1Q8VC85 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Lsm1Q8VC85 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Lsm1Q8VC85 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Lsm1Q8VC85 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Lsm1Q8VC85 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Lsm1Q8VC85 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Lsm1Q8VC85 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Lsm1Q8VC85 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Lsm1Q8VC85 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Lsm1Q8VC85 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Lsm1Q8VC85 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC15.78■□□□□ 0.12
Lsm1Q8VC85 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC15.78■□□□□ 0.12
Lsm1Q8VC85 Gm11539-201ENSMUST00000119837 557 ntBASIC15.78■□□□□ 0.12
Lsm1Q8VC85 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC15.78■□□□□ 0.12
Lsm1Q8VC85 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 70.9 ms