Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC19.94■□□□□ 0.78
Ccdc9Q8VC31 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC19.94■□□□□ 0.78
Ccdc9Q8VC31 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC19.94■□□□□ 0.78
Ccdc9Q8VC31 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ccdc9Q8VC31 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ccdc9Q8VC31 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ccdc9Q8VC31 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ccdc9Q8VC31 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ccdc9Q8VC31 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ccdc9Q8VC31 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Ccdc9Q8VC31 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ccdc9Q8VC31 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC19.94■□□□□ 0.78
Ccdc9Q8VC31 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ccdc9Q8VC31 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC19.93■□□□□ 0.78
Ccdc9Q8VC31 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Ccdc9Q8VC31 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ccdc9Q8VC31 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ccdc9Q8VC31 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
Ccdc9Q8VC31 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC19.93■□□□□ 0.78
Ccdc9Q8VC31 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ccdc9Q8VC31 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Ccdc9Q8VC31 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC19.93■□□□□ 0.78
Ccdc9Q8VC31 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ccdc9Q8VC31 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC19.93■□□□□ 0.78
Ccdc9Q8VC31 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ccdc9Q8VC31 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Ccdc9Q8VC31 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC19.93■□□□□ 0.78
Ccdc9Q8VC31 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ccdc9Q8VC31 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Ccdc9Q8VC31 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ccdc9Q8VC31 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Ccdc9Q8VC31 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ccdc9Q8VC31 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ccdc9Q8VC31 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ccdc9Q8VC31 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ccdc9Q8VC31 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ccdc9Q8VC31 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ccdc9Q8VC31 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ccdc9Q8VC31 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Ccdc9Q8VC31 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ccdc9Q8VC31 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ccdc9Q8VC31 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ccdc9Q8VC31 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ccdc9Q8VC31 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ccdc9Q8VC31 Gm8309-201ENSMUST00000206627 1448 ntBASIC19.92■□□□□ 0.78
Ccdc9Q8VC31 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ccdc9Q8VC31 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC19.92■□□□□ 0.78
Ccdc9Q8VC31 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ccdc9Q8VC31 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Ccdc9Q8VC31 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
Ccdc9Q8VC31 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc9Q8VC31 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc9Q8VC31 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Ccdc9Q8VC31 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc9Q8VC31 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc9Q8VC31 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19.91■□□□□ 0.78
Ccdc9Q8VC31 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC19.91■□□□□ 0.78
Ccdc9Q8VC31 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
Ccdc9Q8VC31 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc9Q8VC31 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc9Q8VC31 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc9Q8VC31 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc9Q8VC31 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc9Q8VC31 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc9Q8VC31 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Ccdc9Q8VC31 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc9Q8VC31 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc9Q8VC31 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC19.9■□□□□ 0.78
Ccdc9Q8VC31 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc9Q8VC31 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc9Q8VC31 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Ccdc9Q8VC31 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc9Q8VC31 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc9Q8VC31 Gm7860-201ENSMUST00000121190 879 ntBASIC19.9■□□□□ 0.78
Ccdc9Q8VC31 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc9Q8VC31 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC19.9■□□□□ 0.78
Ccdc9Q8VC31 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc9Q8VC31 Gm10676-201ENSMUST00000098778 3221 ntBASIC19.9■□□□□ 0.78
Ccdc9Q8VC31 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC19.9■□□□□ 0.78
Ccdc9Q8VC31 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc9Q8VC31 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc9Q8VC31 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc9Q8VC31 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc9Q8VC31 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Ccdc9Q8VC31 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Ccdc9Q8VC31 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Ccdc9Q8VC31 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ccdc9Q8VC31 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ccdc9Q8VC31 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
Ccdc9Q8VC31 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Ccdc9Q8VC31 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ccdc9Q8VC31 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC19.89■□□□□ 0.77
Ccdc9Q8VC31 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ccdc9Q8VC31 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ccdc9Q8VC31 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ccdc9Q8VC31 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Ccdc9Q8VC31 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Ccdc9Q8VC31 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC19.89■□□□□ 0.77
Ccdc9Q8VC31 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Ccdc9Q8VC31 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms