Protein–RNA interactions for Protein: Q8R422

Cd109, CD109 antigen, mousemouse

Predictions only

Length 1,442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd109Q8R422 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Cd109Q8R422 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Cd109Q8R422 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
Cd109Q8R422 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Cd109Q8R422 AC132265.1-201ENSMUST00000219233 1665 ntBASIC23.32■■□□□ 1.32
Cd109Q8R422 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Cd109Q8R422 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Cd109Q8R422 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC23.32■■□□□ 1.32
Cd109Q8R422 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
Cd109Q8R422 Gm43073-201ENSMUST00000198200 1189 ntBASIC23.32■■□□□ 1.32
Cd109Q8R422 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Cd109Q8R422 Psmb5-202ENSMUST00000227257 622 ntBASIC23.32■■□□□ 1.32
Cd109Q8R422 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Cd109Q8R422 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
Cd109Q8R422 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Cd109Q8R422 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
Cd109Q8R422 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Cd109Q8R422 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Cd109Q8R422 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Cd109Q8R422 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
Cd109Q8R422 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Cd109Q8R422 Gm43332-201ENSMUST00000202511 1044 ntBASIC23.31■■□□□ 1.32
Cd109Q8R422 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC23.31■■□□□ 1.32
Cd109Q8R422 AV026068-213ENSMUST00000223675 1171 ntBASIC23.31■■□□□ 1.32
Cd109Q8R422 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
Cd109Q8R422 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Cd109Q8R422 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Cd109Q8R422 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Cd109Q8R422 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Cd109Q8R422 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC23.3■■□□□ 1.32
Cd109Q8R422 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Cd109Q8R422 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Cd109Q8R422 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Cd109Q8R422 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Cd109Q8R422 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Cd109Q8R422 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Cd109Q8R422 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Cd109Q8R422 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Cd109Q8R422 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Cd109Q8R422 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Cd109Q8R422 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Cd109Q8R422 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Cd109Q8R422 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC23.29■■□□□ 1.32
Cd109Q8R422 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
Cd109Q8R422 Gm8000-201ENSMUST00000188378 592 ntBASIC23.29■■□□□ 1.32
Cd109Q8R422 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC23.29■■□□□ 1.32
Cd109Q8R422 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC23.29■■□□□ 1.32
Cd109Q8R422 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Cd109Q8R422 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
Cd109Q8R422 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
Cd109Q8R422 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Cd109Q8R422 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Cd109Q8R422 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Cd109Q8R422 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Cd109Q8R422 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Cd109Q8R422 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Cd109Q8R422 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Cd109Q8R422 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Cd109Q8R422 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC23.28■■□□□ 1.32
Cd109Q8R422 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Cd109Q8R422 Gm43702-201ENSMUST00000198772 2546 ntBASIC23.28■■□□□ 1.32
Cd109Q8R422 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Cd109Q8R422 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC23.27■■□□□ 1.32
Cd109Q8R422 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC23.27■■□□□ 1.32
Cd109Q8R422 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
Cd109Q8R422 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Cd109Q8R422 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Cd109Q8R422 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Cd109Q8R422 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Cd109Q8R422 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Cd109Q8R422 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
Cd109Q8R422 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Cd109Q8R422 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Cd109Q8R422 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Cd109Q8R422 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC23.26■■□□□ 1.31
Cd109Q8R422 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC23.26■■□□□ 1.31
Cd109Q8R422 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC23.26■■□□□ 1.31
Cd109Q8R422 Gm8655-201ENSMUST00000221159 852 ntBASIC23.26■■□□□ 1.31
Cd109Q8R422 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
Cd109Q8R422 Gm15590-201ENSMUST00000078419 552 ntBASIC23.26■■□□□ 1.31
Cd109Q8R422 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Cd109Q8R422 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Cd109Q8R422 Gm16401-202ENSMUST00000197463 2074 ntBASIC23.26■■□□□ 1.31
Cd109Q8R422 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Cd109Q8R422 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC23.26■■□□□ 1.31
Cd109Q8R422 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Cd109Q8R422 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Cd109Q8R422 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC23.26■■□□□ 1.31
Cd109Q8R422 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Cd109Q8R422 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Cd109Q8R422 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
Cd109Q8R422 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Cd109Q8R422 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC23.25■■□□□ 1.31
Cd109Q8R422 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
Cd109Q8R422 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Cd109Q8R422 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC23.25■■□□□ 1.31
Cd109Q8R422 Gm42670-201ENSMUST00000201816 1292 ntBASIC23.25■■□□□ 1.31
Cd109Q8R422 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC23.25■■□□□ 1.31
Cd109Q8R422 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Cd109Q8R422 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms