Protein–RNA interactions for Protein: Q8R2T8

Gtf3c5, General transcription factor 3C polypeptide 5, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c5Q8R2T8 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Gtf3c5Q8R2T8 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gtf3c5Q8R2T8 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gtf3c5Q8R2T8 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gtf3c5Q8R2T8 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Gtf3c5Q8R2T8 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Gtf3c5Q8R2T8 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gtf3c5Q8R2T8 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Gtf3c5Q8R2T8 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gtf3c5Q8R2T8 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gtf3c5Q8R2T8 Gm5587-201ENSMUST00000206270 674 ntBASIC19.35■□□□□ 0.69
Gtf3c5Q8R2T8 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC19.35■□□□□ 0.69
Gtf3c5Q8R2T8 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gtf3c5Q8R2T8 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Gtf3c5Q8R2T8 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gtf3c5Q8R2T8 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gtf3c5Q8R2T8 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Gtf3c5Q8R2T8 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gtf3c5Q8R2T8 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gtf3c5Q8R2T8 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gtf3c5Q8R2T8 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gtf3c5Q8R2T8 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gtf3c5Q8R2T8 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gtf3c5Q8R2T8 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
Gtf3c5Q8R2T8 AL590614.2-201ENSMUST00000225374 1937 ntBASIC19.34■□□□□ 0.69
Gtf3c5Q8R2T8 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Gtf3c5Q8R2T8 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC19.34■□□□□ 0.69
Gtf3c5Q8R2T8 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gtf3c5Q8R2T8 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC19.34■□□□□ 0.69
Gtf3c5Q8R2T8 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gtf3c5Q8R2T8 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gtf3c5Q8R2T8 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gtf3c5Q8R2T8 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gtf3c5Q8R2T8 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gtf3c5Q8R2T8 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gtf3c5Q8R2T8 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Gtf3c5Q8R2T8 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gtf3c5Q8R2T8 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Gtf3c5Q8R2T8 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
Gtf3c5Q8R2T8 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Gtf3c5Q8R2T8 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Gtf3c5Q8R2T8 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC19.33■□□□□ 0.69
Gtf3c5Q8R2T8 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC19.33■□□□□ 0.69
Gtf3c5Q8R2T8 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Gtf3c5Q8R2T8 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC19.33■□□□□ 0.69
Gtf3c5Q8R2T8 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Gtf3c5Q8R2T8 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Gtf3c5Q8R2T8 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Gtf3c5Q8R2T8 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
Gtf3c5Q8R2T8 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Gtf3c5Q8R2T8 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Gtf3c5Q8R2T8 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC19.33■□□□□ 0.68
Gtf3c5Q8R2T8 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Gtf3c5Q8R2T8 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Gtf3c5Q8R2T8 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Gtf3c5Q8R2T8 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Gtf3c5Q8R2T8 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Gtf3c5Q8R2T8 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Gtf3c5Q8R2T8 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gtf3c5Q8R2T8 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gtf3c5Q8R2T8 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Gtf3c5Q8R2T8 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gtf3c5Q8R2T8 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Gtf3c5Q8R2T8 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gtf3c5Q8R2T8 Shroom3-211ENSMUST00000225438 5742 ntBASIC19.32■□□□□ 0.68
Gtf3c5Q8R2T8 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gtf3c5Q8R2T8 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Gtf3c5Q8R2T8 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Gtf3c5Q8R2T8 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Gtf3c5Q8R2T8 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Gtf3c5Q8R2T8 Gm29707-201ENSMUST00000196325 491 ntBASIC19.32■□□□□ 0.68
Gtf3c5Q8R2T8 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC19.32■□□□□ 0.68
Gtf3c5Q8R2T8 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gtf3c5Q8R2T8 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gtf3c5Q8R2T8 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gtf3c5Q8R2T8 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Gtf3c5Q8R2T8 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC19.32■□□□□ 0.68
Gtf3c5Q8R2T8 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gtf3c5Q8R2T8 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC19.32■□□□□ 0.68
Gtf3c5Q8R2T8 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gtf3c5Q8R2T8 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gtf3c5Q8R2T8 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Gtf3c5Q8R2T8 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gtf3c5Q8R2T8 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Gtf3c5Q8R2T8 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Gtf3c5Q8R2T8 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gtf3c5Q8R2T8 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gtf3c5Q8R2T8 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gtf3c5Q8R2T8 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gtf3c5Q8R2T8 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gtf3c5Q8R2T8 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Gtf3c5Q8R2T8 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gtf3c5Q8R2T8 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gtf3c5Q8R2T8 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC19.31■□□□□ 0.68
Gtf3c5Q8R2T8 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Gtf3c5Q8R2T8 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gtf3c5Q8R2T8 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gtf3c5Q8R2T8 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Gtf3c5Q8R2T8 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Gtf3c5Q8R2T8 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms