Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Chmp7Q8R1T1 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
Chmp7Q8R1T1 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Chmp7Q8R1T1 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Chmp7Q8R1T1 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Chmp7Q8R1T1 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
Chmp7Q8R1T1 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Chmp7Q8R1T1 Gm11620-201ENSMUST00000118770 1845 ntBASIC21.07■□□□□ 0.96
Chmp7Q8R1T1 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Chmp7Q8R1T1 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Chmp7Q8R1T1 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
Chmp7Q8R1T1 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Chmp7Q8R1T1 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Chmp7Q8R1T1 Gm5712-201ENSMUST00000199748 1043 ntBASIC21.07■□□□□ 0.96
Chmp7Q8R1T1 Vti1a-206ENSMUST00000225529 1244 ntBASIC21.07■□□□□ 0.96
Chmp7Q8R1T1 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Chmp7Q8R1T1 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Chmp7Q8R1T1 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Chmp7Q8R1T1 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Chmp7Q8R1T1 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Chmp7Q8R1T1 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC21.06■□□□□ 0.96
Chmp7Q8R1T1 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Chmp7Q8R1T1 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Chmp7Q8R1T1 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC21.06■□□□□ 0.96
Chmp7Q8R1T1 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Chmp7Q8R1T1 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Chmp7Q8R1T1 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Chmp7Q8R1T1 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Chmp7Q8R1T1 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Chmp7Q8R1T1 Gm7507-201ENSMUST00000183053 1008 ntBASIC21.06■□□□□ 0.96
Chmp7Q8R1T1 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Chmp7Q8R1T1 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC21.06■□□□□ 0.96
Chmp7Q8R1T1 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC21.06■□□□□ 0.96
Chmp7Q8R1T1 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC21.06■□□□□ 0.96
Chmp7Q8R1T1 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC21.06■□□□□ 0.96
Chmp7Q8R1T1 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Chmp7Q8R1T1 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Chmp7Q8R1T1 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Chmp7Q8R1T1 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Chmp7Q8R1T1 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Chmp7Q8R1T1 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Chmp7Q8R1T1 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Chmp7Q8R1T1 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Chmp7Q8R1T1 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Chmp7Q8R1T1 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Chmp7Q8R1T1 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Chmp7Q8R1T1 Gm1401-201ENSMUST00000122048 772 ntBASIC21.05■□□□□ 0.96
Chmp7Q8R1T1 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Chmp7Q8R1T1 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC21.05■□□□□ 0.96
Chmp7Q8R1T1 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Chmp7Q8R1T1 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC21.05■□□□□ 0.96
Chmp7Q8R1T1 Gm7506-201ENSMUST00000207758 815 ntBASIC21.05■□□□□ 0.96
Chmp7Q8R1T1 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Chmp7Q8R1T1 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Chmp7Q8R1T1 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Chmp7Q8R1T1 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Chmp7Q8R1T1 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Chmp7Q8R1T1 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Chmp7Q8R1T1 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Chmp7Q8R1T1 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Chmp7Q8R1T1 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Chmp7Q8R1T1 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Chmp7Q8R1T1 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Chmp7Q8R1T1 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC21.04■□□□□ 0.96
Chmp7Q8R1T1 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Chmp7Q8R1T1 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC21.04■□□□□ 0.96
Chmp7Q8R1T1 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Chmp7Q8R1T1 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Chmp7Q8R1T1 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Chmp7Q8R1T1 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Chmp7Q8R1T1 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Chmp7Q8R1T1 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Chmp7Q8R1T1 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Chmp7Q8R1T1 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Chmp7Q8R1T1 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC21.03■□□□□ 0.96
Chmp7Q8R1T1 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Chmp7Q8R1T1 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Chmp7Q8R1T1 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Chmp7Q8R1T1 Gm12350-201ENSMUST00000121208 462 ntBASIC21.03■□□□□ 0.96
Chmp7Q8R1T1 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC21.03■□□□□ 0.96
Chmp7Q8R1T1 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
Chmp7Q8R1T1 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC21.03■□□□□ 0.96
Chmp7Q8R1T1 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Chmp7Q8R1T1 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Chmp7Q8R1T1 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC21.03■□□□□ 0.96
Chmp7Q8R1T1 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Chmp7Q8R1T1 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Chmp7Q8R1T1 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Chmp7Q8R1T1 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Chmp7Q8R1T1 Gm43182-201ENSMUST00000199476 2528 ntBASIC21.03■□□□□ 0.96
Chmp7Q8R1T1 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Chmp7Q8R1T1 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Chmp7Q8R1T1 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Chmp7Q8R1T1 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Chmp7Q8R1T1 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Chmp7Q8R1T1 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Chmp7Q8R1T1 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Chmp7Q8R1T1 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Chmp7Q8R1T1 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Chmp7Q8R1T1 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms