Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC21.55■■□□□ 1.04
Ddx54Q8K4L0 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC21.55■■□□□ 1.04
Ddx54Q8K4L0 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC21.55■■□□□ 1.04
Ddx54Q8K4L0 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ddx54Q8K4L0 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Ddx54Q8K4L0 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ddx54Q8K4L0 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ddx54Q8K4L0 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ddx54Q8K4L0 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ddx54Q8K4L0 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ddx54Q8K4L0 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ddx54Q8K4L0 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC21.55■■□□□ 1.04
Ddx54Q8K4L0 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ddx54Q8K4L0 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
Ddx54Q8K4L0 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ddx54Q8K4L0 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ddx54Q8K4L0 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC21.54■■□□□ 1.04
Ddx54Q8K4L0 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ddx54Q8K4L0 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ddx54Q8K4L0 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Ddx54Q8K4L0 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
Ddx54Q8K4L0 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Ddx54Q8K4L0 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Ddx54Q8K4L0 AC131709.1-201ENSMUST00000224731 1180 ntBASIC21.54■■□□□ 1.04
Ddx54Q8K4L0 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Ddx54Q8K4L0 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ddx54Q8K4L0 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC21.54■■□□□ 1.04
Ddx54Q8K4L0 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Ddx54Q8K4L0 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ddx54Q8K4L0 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ddx54Q8K4L0 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ddx54Q8K4L0 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ddx54Q8K4L0 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
Ddx54Q8K4L0 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ddx54Q8K4L0 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ddx54Q8K4L0 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Ddx54Q8K4L0 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ddx54Q8K4L0 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ddx54Q8K4L0 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ddx54Q8K4L0 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ddx54Q8K4L0 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ddx54Q8K4L0 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Ddx54Q8K4L0 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ddx54Q8K4L0 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ddx54Q8K4L0 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC21.53■■□□□ 1.04
Ddx54Q8K4L0 Gm5682-201ENSMUST00000173402 505 ntBASIC21.53■■□□□ 1.04
Ddx54Q8K4L0 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC21.53■■□□□ 1.04
Ddx54Q8K4L0 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ddx54Q8K4L0 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ddx54Q8K4L0 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC21.53■■□□□ 1.04
Ddx54Q8K4L0 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ddx54Q8K4L0 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ddx54Q8K4L0 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC21.53■■□□□ 1.04
Ddx54Q8K4L0 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ddx54Q8K4L0 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ddx54Q8K4L0 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ddx54Q8K4L0 Gm10616-201ENSMUST00000205285 2127 ntBASIC21.52■■□□□ 1.04
Ddx54Q8K4L0 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Ddx54Q8K4L0 Gm5745-201ENSMUST00000183748 313 ntBASIC21.52■■□□□ 1.04
Ddx54Q8K4L0 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC21.52■■□□□ 1.04
Ddx54Q8K4L0 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Ddx54Q8K4L0 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC21.52■■□□□ 1.04
Ddx54Q8K4L0 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
Ddx54Q8K4L0 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Ddx54Q8K4L0 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ddx54Q8K4L0 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ddx54Q8K4L0 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ddx54Q8K4L0 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Ddx54Q8K4L0 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Ddx54Q8K4L0 Ddx41-204ENSMUST00000224765 2199 ntBASIC21.51■■□□□ 1.03
Ddx54Q8K4L0 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ddx54Q8K4L0 AL590614.2-201ENSMUST00000225374 1937 ntBASIC21.51■■□□□ 1.03
Ddx54Q8K4L0 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ddx54Q8K4L0 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ddx54Q8K4L0 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC21.51■■□□□ 1.03
Ddx54Q8K4L0 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC21.51■■□□□ 1.03
Ddx54Q8K4L0 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
Ddx54Q8K4L0 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ddx54Q8K4L0 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ddx54Q8K4L0 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ddx54Q8K4L0 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC21.51■■□□□ 1.03
Ddx54Q8K4L0 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ddx54Q8K4L0 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ddx54Q8K4L0 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ddx54Q8K4L0 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ddx54Q8K4L0 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ddx54Q8K4L0 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ddx54Q8K4L0 Gm11764-201ENSMUST00000120221 623 ntBASIC21.5■■□□□ 1.03
Ddx54Q8K4L0 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC21.5■■□□□ 1.03
Ddx54Q8K4L0 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC21.5■■□□□ 1.03
Ddx54Q8K4L0 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC21.5■■□□□ 1.03
Ddx54Q8K4L0 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC21.5■■□□□ 1.03
Ddx54Q8K4L0 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ddx54Q8K4L0 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC21.5■■□□□ 1.03
Ddx54Q8K4L0 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC21.5■■□□□ 1.03
Ddx54Q8K4L0 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC21.5■■□□□ 1.03
Ddx54Q8K4L0 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ddx54Q8K4L0 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ddx54Q8K4L0 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC21.49■■□□□ 1.03
Ddx54Q8K4L0 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC21.49■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms