Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Clrn1Q8K445 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
Clrn1Q8K445 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
Clrn1Q8K445 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC15.58■□□□□ 0.09
Clrn1Q8K445 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
Clrn1Q8K445 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Clrn1Q8K445 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Clrn1Q8K445 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC15.58■□□□□ 0.08
Clrn1Q8K445 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC15.58■□□□□ 0.08
Clrn1Q8K445 Gm18115-201ENSMUST00000221209 621 ntBASIC15.58■□□□□ 0.08
Clrn1Q8K445 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.08
Clrn1Q8K445 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Clrn1Q8K445 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Clrn1Q8K445 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC15.58■□□□□ 0.08
Clrn1Q8K445 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Clrn1Q8K445 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Clrn1Q8K445 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Clrn1Q8K445 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Clrn1Q8K445 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Clrn1Q8K445 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Clrn1Q8K445 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Clrn1Q8K445 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Clrn1Q8K445 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Clrn1Q8K445 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Clrn1Q8K445 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Clrn1Q8K445 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Clrn1Q8K445 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Clrn1Q8K445 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Clrn1Q8K445 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Clrn1Q8K445 Gm10231-201ENSMUST00000181584 441 ntBASIC15.57■□□□□ 0.08
Clrn1Q8K445 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Clrn1Q8K445 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Clrn1Q8K445 Gm10175-202ENSMUST00000208752 441 ntBASIC15.57■□□□□ 0.08
Clrn1Q8K445 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC15.57■□□□□ 0.08
Clrn1Q8K445 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Clrn1Q8K445 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Clrn1Q8K445 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Clrn1Q8K445 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Clrn1Q8K445 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Clrn1Q8K445 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Clrn1Q8K445 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Clrn1Q8K445 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Clrn1Q8K445 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Clrn1Q8K445 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Clrn1Q8K445 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Clrn1Q8K445 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Clrn1Q8K445 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Clrn1Q8K445 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Clrn1Q8K445 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC15.56■□□□□ 0.08
Clrn1Q8K445 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Clrn1Q8K445 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Clrn1Q8K445 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Clrn1Q8K445 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
Clrn1Q8K445 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Clrn1Q8K445 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Clrn1Q8K445 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Clrn1Q8K445 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Clrn1Q8K445 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Clrn1Q8K445 Gm21559-201ENSMUST00000220638 855 ntBASIC15.56■□□□□ 0.08
Clrn1Q8K445 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Clrn1Q8K445 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Clrn1Q8K445 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Clrn1Q8K445 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Clrn1Q8K445 Gm8587-201ENSMUST00000076538 843 ntBASIC15.56■□□□□ 0.08
Clrn1Q8K445 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Clrn1Q8K445 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Clrn1Q8K445 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Clrn1Q8K445 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Clrn1Q8K445 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Clrn1Q8K445 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Clrn1Q8K445 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Clrn1Q8K445 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Clrn1Q8K445 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Clrn1Q8K445 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Clrn1Q8K445 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Clrn1Q8K445 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Clrn1Q8K445 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Clrn1Q8K445 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Clrn1Q8K445 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Clrn1Q8K445 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
Clrn1Q8K445 Gm26917-202ENSMUST00000192833 3329 ntBASIC15.55■□□□□ 0.08
Clrn1Q8K445 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Clrn1Q8K445 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Clrn1Q8K445 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Clrn1Q8K445 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Clrn1Q8K445 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Clrn1Q8K445 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Clrn1Q8K445 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Clrn1Q8K445 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Clrn1Q8K445 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Clrn1Q8K445 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Clrn1Q8K445 Gm11336-201ENSMUST00000118168 334 ntBASIC15.55■□□□□ 0.08
Clrn1Q8K445 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Clrn1Q8K445 Gm18032-201ENSMUST00000222541 538 ntBASIC15.55■□□□□ 0.08
Clrn1Q8K445 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Clrn1Q8K445 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Clrn1Q8K445 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Clrn1Q8K445 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC15.55■□□□□ 0.08
Clrn1Q8K445 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Clrn1Q8K445 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms