Protein–RNA interactions for Protein: Q8K3P5

Cnot6, CCR4-NOT transcription complex subunit 6, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnot6Q8K3P5 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Cnot6Q8K3P5 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC16.21■□□□□ 0.19
Cnot6Q8K3P5 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cnot6Q8K3P5 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cnot6Q8K3P5 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cnot6Q8K3P5 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Cnot6Q8K3P5 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Cnot6Q8K3P5 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Cnot6Q8K3P5 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Cnot6Q8K3P5 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cnot6Q8K3P5 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cnot6Q8K3P5 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Cnot6Q8K3P5 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cnot6Q8K3P5 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cnot6Q8K3P5 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cnot6Q8K3P5 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Cnot6Q8K3P5 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cnot6Q8K3P5 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.2■□□□□ 0.18
Cnot6Q8K3P5 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Cnot6Q8K3P5 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cnot6Q8K3P5 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC16.2■□□□□ 0.18
Cnot6Q8K3P5 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC16.2■□□□□ 0.18
Cnot6Q8K3P5 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC16.2■□□□□ 0.18
Cnot6Q8K3P5 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC16.2■□□□□ 0.18
Cnot6Q8K3P5 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cnot6Q8K3P5 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cnot6Q8K3P5 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cnot6Q8K3P5 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cnot6Q8K3P5 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cnot6Q8K3P5 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cnot6Q8K3P5 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Cnot6Q8K3P5 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cnot6Q8K3P5 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cnot6Q8K3P5 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cnot6Q8K3P5 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Cnot6Q8K3P5 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cnot6Q8K3P5 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cnot6Q8K3P5 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cnot6Q8K3P5 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cnot6Q8K3P5 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.19■□□□□ 0.18
Cnot6Q8K3P5 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cnot6Q8K3P5 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cnot6Q8K3P5 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cnot6Q8K3P5 Gm715-201ENSMUST00000117865 831 ntBASIC16.19■□□□□ 0.18
Cnot6Q8K3P5 Gm13181-201ENSMUST00000120117 1069 ntBASIC16.19■□□□□ 0.18
Cnot6Q8K3P5 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Cnot6Q8K3P5 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC16.19■□□□□ 0.18
Cnot6Q8K3P5 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC16.19■□□□□ 0.18
Cnot6Q8K3P5 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Cnot6Q8K3P5 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cnot6Q8K3P5 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cnot6Q8K3P5 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.19■□□□□ 0.18
Cnot6Q8K3P5 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cnot6Q8K3P5 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cnot6Q8K3P5 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cnot6Q8K3P5 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cnot6Q8K3P5 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Cnot6Q8K3P5 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cnot6Q8K3P5 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Cnot6Q8K3P5 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cnot6Q8K3P5 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cnot6Q8K3P5 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.18■□□□□ 0.18
Cnot6Q8K3P5 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Cnot6Q8K3P5 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cnot6Q8K3P5 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Cnot6Q8K3P5 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC16.18■□□□□ 0.18
Cnot6Q8K3P5 AL590614.2-201ENSMUST00000225374 1937 ntBASIC16.18■□□□□ 0.18
Cnot6Q8K3P5 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cnot6Q8K3P5 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC16.18■□□□□ 0.18
Cnot6Q8K3P5 Gm9694-201ENSMUST00000193347 1189 ntBASIC16.18■□□□□ 0.18
Cnot6Q8K3P5 Gm16042-201ENSMUST00000204813 1247 ntBASIC16.18■□□□□ 0.18
Cnot6Q8K3P5 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC16.18■□□□□ 0.18
Cnot6Q8K3P5 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Cnot6Q8K3P5 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cnot6Q8K3P5 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cnot6Q8K3P5 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC16.18■□□□□ 0.18
Cnot6Q8K3P5 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cnot6Q8K3P5 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC16.18■□□□□ 0.18
Cnot6Q8K3P5 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cnot6Q8K3P5 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cnot6Q8K3P5 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Cnot6Q8K3P5 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cnot6Q8K3P5 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Cnot6Q8K3P5 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cnot6Q8K3P5 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cnot6Q8K3P5 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cnot6Q8K3P5 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cnot6Q8K3P5 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cnot6Q8K3P5 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Cnot6Q8K3P5 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cnot6Q8K3P5 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC16.17■□□□□ 0.18
Cnot6Q8K3P5 Arhgef33-211ENSMUST00000225658 473 ntBASIC16.17■□□□□ 0.18
Cnot6Q8K3P5 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cnot6Q8K3P5 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cnot6Q8K3P5 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cnot6Q8K3P5 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Cnot6Q8K3P5 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Cnot6Q8K3P5 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cnot6Q8K3P5 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Cnot6Q8K3P5 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms