Protein–RNA interactions for Protein: Q8K377

Lrrtm1, Leucine-rich repeat transmembrane neuronal protein 1, mousemouse

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrtm1Q8K377 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lrrtm1Q8K377 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lrrtm1Q8K377 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC14.2□□□□□ -0.14
Lrrtm1Q8K377 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lrrtm1Q8K377 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lrrtm1Q8K377 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lrrtm1Q8K377 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lrrtm1Q8K377 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lrrtm1Q8K377 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lrrtm1Q8K377 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lrrtm1Q8K377 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lrrtm1Q8K377 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lrrtm1Q8K377 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
Lrrtm1Q8K377 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC14.2□□□□□ -0.14
Lrrtm1Q8K377 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lrrtm1Q8K377 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC14.19□□□□□ -0.14
Lrrtm1Q8K377 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC14.19□□□□□ -0.14
Lrrtm1Q8K377 Gm21596-201ENSMUST00000178049 1316 ntBASIC14.19□□□□□ -0.14
Lrrtm1Q8K377 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lrrtm1Q8K377 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lrrtm1Q8K377 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Lrrtm1Q8K377 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Lrrtm1Q8K377 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lrrtm1Q8K377 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lrrtm1Q8K377 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lrrtm1Q8K377 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lrrtm1Q8K377 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lrrtm1Q8K377 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lrrtm1Q8K377 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lrrtm1Q8K377 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Lrrtm1Q8K377 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC14.19□□□□□ -0.14
Lrrtm1Q8K377 Gm42545-201ENSMUST00000202755 922 ntBASIC14.19□□□□□ -0.14
Lrrtm1Q8K377 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC14.19□□□□□ -0.14
Lrrtm1Q8K377 AC153526.5-201ENSMUST00000218661 2147 ntBASIC14.19□□□□□ -0.14
Lrrtm1Q8K377 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lrrtm1Q8K377 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lrrtm1Q8K377 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC14.19□□□□□ -0.14
Lrrtm1Q8K377 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lrrtm1Q8K377 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lrrtm1Q8K377 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
Lrrtm1Q8K377 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lrrtm1Q8K377 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Lrrtm1Q8K377 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lrrtm1Q8K377 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lrrtm1Q8K377 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lrrtm1Q8K377 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lrrtm1Q8K377 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lrrtm1Q8K377 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Lrrtm1Q8K377 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lrrtm1Q8K377 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
Lrrtm1Q8K377 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Lrrtm1Q8K377 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lrrtm1Q8K377 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Lrrtm1Q8K377 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Lrrtm1Q8K377 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Lrrtm1Q8K377 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lrrtm1Q8K377 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Lrrtm1Q8K377 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Lrrtm1Q8K377 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC14.18□□□□□ -0.14
Lrrtm1Q8K377 Gm3807-201ENSMUST00000193520 1168 ntBASIC14.18□□□□□ -0.14
Lrrtm1Q8K377 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lrrtm1Q8K377 Gm18025-201ENSMUST00000221733 862 ntBASIC14.18□□□□□ -0.14
Lrrtm1Q8K377 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Lrrtm1Q8K377 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lrrtm1Q8K377 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lrrtm1Q8K377 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lrrtm1Q8K377 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC14.18□□□□□ -0.14
Lrrtm1Q8K377 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lrrtm1Q8K377 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Lrrtm1Q8K377 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Lrrtm1Q8K377 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Lrrtm1Q8K377 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lrrtm1Q8K377 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lrrtm1Q8K377 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lrrtm1Q8K377 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lrrtm1Q8K377 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lrrtm1Q8K377 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lrrtm1Q8K377 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lrrtm1Q8K377 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lrrtm1Q8K377 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lrrtm1Q8K377 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lrrtm1Q8K377 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lrrtm1Q8K377 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lrrtm1Q8K377 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lrrtm1Q8K377 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lrrtm1Q8K377 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lrrtm1Q8K377 Gm4974-201ENSMUST00000209974 875 ntBASIC14.17□□□□□ -0.14
Lrrtm1Q8K377 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lrrtm1Q8K377 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC14.17□□□□□ -0.14
Lrrtm1Q8K377 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lrrtm1Q8K377 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Lrrtm1Q8K377 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lrrtm1Q8K377 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lrrtm1Q8K377 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lrrtm1Q8K377 AL590614.2-201ENSMUST00000225374 1937 ntBASIC14.17□□□□□ -0.14
Lrrtm1Q8K377 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lrrtm1Q8K377 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC14.16□□□□□ -0.14
Lrrtm1Q8K377 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Lrrtm1Q8K377 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lrrtm1Q8K377 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms