Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC19.04■□□□□ 0.64
Rtn1Q8K0T0 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rtn1Q8K0T0 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rtn1Q8K0T0 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rtn1Q8K0T0 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rtn1Q8K0T0 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rtn1Q8K0T0 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rtn1Q8K0T0 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC19.04■□□□□ 0.64
Rtn1Q8K0T0 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rtn1Q8K0T0 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Rtn1Q8K0T0 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Rtn1Q8K0T0 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Rtn1Q8K0T0 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rtn1Q8K0T0 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rtn1Q8K0T0 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Rtn1Q8K0T0 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rtn1Q8K0T0 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rtn1Q8K0T0 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rtn1Q8K0T0 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC19.03■□□□□ 0.64
Rtn1Q8K0T0 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rtn1Q8K0T0 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
Rtn1Q8K0T0 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
Rtn1Q8K0T0 Gm8258-201ENSMUST00000055593 1449 ntBASIC19.03■□□□□ 0.64
Rtn1Q8K0T0 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rtn1Q8K0T0 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Rtn1Q8K0T0 Gm6728-201ENSMUST00000178117 1065 ntBASIC19.03■□□□□ 0.64
Rtn1Q8K0T0 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rtn1Q8K0T0 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rtn1Q8K0T0 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Rtn1Q8K0T0 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rtn1Q8K0T0 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rtn1Q8K0T0 Gm15743-202ENSMUST00000182690 1901 ntBASIC19.03■□□□□ 0.64
Rtn1Q8K0T0 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rtn1Q8K0T0 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rtn1Q8K0T0 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Rtn1Q8K0T0 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rtn1Q8K0T0 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rtn1Q8K0T0 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rtn1Q8K0T0 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Rtn1Q8K0T0 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rtn1Q8K0T0 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rtn1Q8K0T0 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rtn1Q8K0T0 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rtn1Q8K0T0 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rtn1Q8K0T0 AA414768-201ENSMUST00000121924 1257 ntBASIC19.02■□□□□ 0.64
Rtn1Q8K0T0 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC19.02■□□□□ 0.64
Rtn1Q8K0T0 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC19.02■□□□□ 0.64
Rtn1Q8K0T0 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC19.02■□□□□ 0.64
Rtn1Q8K0T0 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rtn1Q8K0T0 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
Rtn1Q8K0T0 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Rtn1Q8K0T0 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Rtn1Q8K0T0 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Rtn1Q8K0T0 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rtn1Q8K0T0 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC19.01■□□□□ 0.63
Rtn1Q8K0T0 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Rtn1Q8K0T0 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rtn1Q8K0T0 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC19.01■□□□□ 0.63
Rtn1Q8K0T0 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rtn1Q8K0T0 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rtn1Q8K0T0 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rtn1Q8K0T0 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC19.01■□□□□ 0.63
Rtn1Q8K0T0 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rtn1Q8K0T0 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rtn1Q8K0T0 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rtn1Q8K0T0 Gm6345-202ENSMUST00000180900 204 ntBASIC19.01■□□□□ 0.63
Rtn1Q8K0T0 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rtn1Q8K0T0 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Rtn1Q8K0T0 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rtn1Q8K0T0 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC19.01■□□□□ 0.63
Rtn1Q8K0T0 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
Rtn1Q8K0T0 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Rtn1Q8K0T0 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Rtn1Q8K0T0 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rtn1Q8K0T0 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rtn1Q8K0T0 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Rtn1Q8K0T0 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rtn1Q8K0T0 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rtn1Q8K0T0 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rtn1Q8K0T0 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rtn1Q8K0T0 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rtn1Q8K0T0 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Rtn1Q8K0T0 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Rtn1Q8K0T0 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Rtn1Q8K0T0 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rtn1Q8K0T0 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC19■□□□□ 0.63
Rtn1Q8K0T0 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rtn1Q8K0T0 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC19■□□□□ 0.63
Rtn1Q8K0T0 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rtn1Q8K0T0 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC19■□□□□ 0.63
Rtn1Q8K0T0 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC19■□□□□ 0.63
Rtn1Q8K0T0 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
Rtn1Q8K0T0 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rtn1Q8K0T0 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC19■□□□□ 0.63
Rtn1Q8K0T0 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Rtn1Q8K0T0 Gm15442-201ENSMUST00000117905 1527 ntBASIC19■□□□□ 0.63
Rtn1Q8K0T0 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Rtn1Q8K0T0 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rtn1Q8K0T0 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rtn1Q8K0T0 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms