Protein–RNA interactions for Protein: Q8JZS7

Hmgcll1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcll1Q8JZS7 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Hmgcll1Q8JZS7 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Hmgcll1Q8JZS7 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Hmgcll1Q8JZS7 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Hmgcll1Q8JZS7 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC16.96■□□□□ 0.31
Hmgcll1Q8JZS7 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Hmgcll1Q8JZS7 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC16.96■□□□□ 0.31
Hmgcll1Q8JZS7 CT009713.7-201ENSMUST00000224689 571 ntBASIC16.96■□□□□ 0.31
Hmgcll1Q8JZS7 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Hmgcll1Q8JZS7 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
Hmgcll1Q8JZS7 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Hmgcll1Q8JZS7 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Hmgcll1Q8JZS7 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
Hmgcll1Q8JZS7 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Hmgcll1Q8JZS7 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Hmgcll1Q8JZS7 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC16.95■□□□□ 0.3
Hmgcll1Q8JZS7 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hmgcll1Q8JZS7 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hmgcll1Q8JZS7 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC16.95■□□□□ 0.3
Hmgcll1Q8JZS7 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hmgcll1Q8JZS7 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hmgcll1Q8JZS7 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hmgcll1Q8JZS7 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hmgcll1Q8JZS7 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Hmgcll1Q8JZS7 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC16.95■□□□□ 0.3
Hmgcll1Q8JZS7 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC16.95■□□□□ 0.3
Hmgcll1Q8JZS7 AC108846.1-201ENSMUST00000214531 513 ntBASIC16.95■□□□□ 0.3
Hmgcll1Q8JZS7 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hmgcll1Q8JZS7 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hmgcll1Q8JZS7 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Hmgcll1Q8JZS7 Gm8839-201ENSMUST00000121279 1645 ntBASIC16.95■□□□□ 0.3
Hmgcll1Q8JZS7 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hmgcll1Q8JZS7 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hmgcll1Q8JZS7 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hmgcll1Q8JZS7 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.95■□□□□ 0.3
Hmgcll1Q8JZS7 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hmgcll1Q8JZS7 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hmgcll1Q8JZS7 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hmgcll1Q8JZS7 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hmgcll1Q8JZS7 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Hmgcll1Q8JZS7 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Hmgcll1Q8JZS7 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hmgcll1Q8JZS7 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Hmgcll1Q8JZS7 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Hmgcll1Q8JZS7 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hmgcll1Q8JZS7 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC16.94■□□□□ 0.3
Hmgcll1Q8JZS7 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC16.94■□□□□ 0.3
Hmgcll1Q8JZS7 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Hmgcll1Q8JZS7 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC16.94■□□□□ 0.3
Hmgcll1Q8JZS7 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Hmgcll1Q8JZS7 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hmgcll1Q8JZS7 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hmgcll1Q8JZS7 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hmgcll1Q8JZS7 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hmgcll1Q8JZS7 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Hmgcll1Q8JZS7 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hmgcll1Q8JZS7 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hmgcll1Q8JZS7 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC16.93■□□□□ 0.3
Hmgcll1Q8JZS7 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hmgcll1Q8JZS7 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC16.93■□□□□ 0.3
Hmgcll1Q8JZS7 Gm44454-201ENSMUST00000198541 138 ntBASIC16.93■□□□□ 0.3
Hmgcll1Q8JZS7 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC16.93■□□□□ 0.3
Hmgcll1Q8JZS7 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hmgcll1Q8JZS7 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hmgcll1Q8JZS7 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hmgcll1Q8JZS7 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC16.93■□□□□ 0.3
Hmgcll1Q8JZS7 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hmgcll1Q8JZS7 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hmgcll1Q8JZS7 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Hmgcll1Q8JZS7 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hmgcll1Q8JZS7 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Hmgcll1Q8JZS7 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Hmgcll1Q8JZS7 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hmgcll1Q8JZS7 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hmgcll1Q8JZS7 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hmgcll1Q8JZS7 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC16.92■□□□□ 0.3
Hmgcll1Q8JZS7 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC16.92■□□□□ 0.3
Hmgcll1Q8JZS7 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hmgcll1Q8JZS7 Gm27459-201ENSMUST00000184860 107 ntBASIC16.92■□□□□ 0.3
Hmgcll1Q8JZS7 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hmgcll1Q8JZS7 AC114585.2-202ENSMUST00000228094 426 ntBASIC16.92■□□□□ 0.3
Hmgcll1Q8JZS7 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hmgcll1Q8JZS7 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Hmgcll1Q8JZS7 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hmgcll1Q8JZS7 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hmgcll1Q8JZS7 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hmgcll1Q8JZS7 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Hmgcll1Q8JZS7 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Hmgcll1Q8JZS7 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hmgcll1Q8JZS7 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hmgcll1Q8JZS7 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Hmgcll1Q8JZS7 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.92■□□□□ 0.3
Hmgcll1Q8JZS7 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Hmgcll1Q8JZS7 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hmgcll1Q8JZS7 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hmgcll1Q8JZS7 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hmgcll1Q8JZS7 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Hmgcll1Q8JZS7 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hmgcll1Q8JZS7 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hmgcll1Q8JZS7 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 70.2 ms