Protein–RNA interactions for Protein: Q8CIG0

Depdc1a, DEP domain-containing protein 1A, mousemouse

Predictions only

Length 804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1aQ8CIG0 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Depdc1aQ8CIG0 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Depdc1aQ8CIG0 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Depdc1aQ8CIG0 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Depdc1aQ8CIG0 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
Depdc1aQ8CIG0 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC18.55■□□□□ 0.56
Depdc1aQ8CIG0 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Depdc1aQ8CIG0 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC18.55■□□□□ 0.56
Depdc1aQ8CIG0 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Depdc1aQ8CIG0 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC18.54■□□□□ 0.56
Depdc1aQ8CIG0 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
Depdc1aQ8CIG0 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Depdc1aQ8CIG0 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Depdc1aQ8CIG0 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Depdc1aQ8CIG0 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Depdc1aQ8CIG0 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Depdc1aQ8CIG0 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
Depdc1aQ8CIG0 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Depdc1aQ8CIG0 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Depdc1aQ8CIG0 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Depdc1aQ8CIG0 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Depdc1aQ8CIG0 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Depdc1aQ8CIG0 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Depdc1aQ8CIG0 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Depdc1aQ8CIG0 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Depdc1aQ8CIG0 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Depdc1aQ8CIG0 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Depdc1aQ8CIG0 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.54■□□□□ 0.56
Depdc1aQ8CIG0 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Depdc1aQ8CIG0 AC121598.2-201ENSMUST00000228376 2325 ntBASIC18.54■□□□□ 0.56
Depdc1aQ8CIG0 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Depdc1aQ8CIG0 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Depdc1aQ8CIG0 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.53■□□□□ 0.56
Depdc1aQ8CIG0 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Depdc1aQ8CIG0 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Depdc1aQ8CIG0 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Depdc1aQ8CIG0 Cmtm5-203ENSMUST00000227441 610 ntBASIC18.53■□□□□ 0.56
Depdc1aQ8CIG0 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Depdc1aQ8CIG0 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Depdc1aQ8CIG0 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Depdc1aQ8CIG0 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Depdc1aQ8CIG0 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Depdc1aQ8CIG0 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Depdc1aQ8CIG0 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Depdc1aQ8CIG0 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Depdc1aQ8CIG0 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.56
Depdc1aQ8CIG0 Gm32996-201ENSMUST00000199828 1447 ntBASIC18.52■□□□□ 0.56
Depdc1aQ8CIG0 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC18.52■□□□□ 0.56
Depdc1aQ8CIG0 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Depdc1aQ8CIG0 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
Depdc1aQ8CIG0 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC18.52■□□□□ 0.56
Depdc1aQ8CIG0 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC18.52■□□□□ 0.56
Depdc1aQ8CIG0 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC18.52■□□□□ 0.56
Depdc1aQ8CIG0 Gm7507-201ENSMUST00000183053 1008 ntBASIC18.52■□□□□ 0.56
Depdc1aQ8CIG0 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Depdc1aQ8CIG0 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Depdc1aQ8CIG0 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
Depdc1aQ8CIG0 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Depdc1aQ8CIG0 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Depdc1aQ8CIG0 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
Depdc1aQ8CIG0 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Depdc1aQ8CIG0 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Depdc1aQ8CIG0 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Depdc1aQ8CIG0 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC18.51■□□□□ 0.55
Depdc1aQ8CIG0 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Depdc1aQ8CIG0 AC159301.1-201ENSMUST00000225130 1182 ntBASIC18.51■□□□□ 0.55
Depdc1aQ8CIG0 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Depdc1aQ8CIG0 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Depdc1aQ8CIG0 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Depdc1aQ8CIG0 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Depdc1aQ8CIG0 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Depdc1aQ8CIG0 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Depdc1aQ8CIG0 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Depdc1aQ8CIG0 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Depdc1aQ8CIG0 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Depdc1aQ8CIG0 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Depdc1aQ8CIG0 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Depdc1aQ8CIG0 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Depdc1aQ8CIG0 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Depdc1aQ8CIG0 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Depdc1aQ8CIG0 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Depdc1aQ8CIG0 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Depdc1aQ8CIG0 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Depdc1aQ8CIG0 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Depdc1aQ8CIG0 AC133598.3-202ENSMUST00000224219 531 ntBASIC18.5■□□□□ 0.55
Depdc1aQ8CIG0 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC18.5■□□□□ 0.55
Depdc1aQ8CIG0 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Depdc1aQ8CIG0 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Depdc1aQ8CIG0 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Depdc1aQ8CIG0 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Depdc1aQ8CIG0 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Depdc1aQ8CIG0 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Depdc1aQ8CIG0 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Depdc1aQ8CIG0 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Depdc1aQ8CIG0 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Depdc1aQ8CIG0 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Depdc1aQ8CIG0 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Depdc1aQ8CIG0 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Depdc1aQ8CIG0 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC18.49■□□□□ 0.55
Depdc1aQ8CIG0 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms