Protein–RNA interactions for Protein: Q8CI51

Pdlim5, PDZ and LIM domain protein 5, mousemouse

Known RBP Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5Q8CI51 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pdlim5Q8CI51 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Pdlim5Q8CI51 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pdlim5Q8CI51 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pdlim5Q8CI51 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Pdlim5Q8CI51 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pdlim5Q8CI51 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Pdlim5Q8CI51 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pdlim5Q8CI51 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pdlim5Q8CI51 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pdlim5Q8CI51 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Pdlim5Q8CI51 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pdlim5Q8CI51 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pdlim5Q8CI51 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC15.18■□□□□ 0.02
Pdlim5Q8CI51 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pdlim5Q8CI51 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pdlim5Q8CI51 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pdlim5Q8CI51 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
Pdlim5Q8CI51 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pdlim5Q8CI51 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC15.18■□□□□ 0.02
Pdlim5Q8CI51 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC15.18■□□□□ 0.02
Pdlim5Q8CI51 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC15.18■□□□□ 0.02
Pdlim5Q8CI51 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pdlim5Q8CI51 Gm4217-201ENSMUST00000182243 1002 ntBASIC15.18■□□□□ 0.02
Pdlim5Q8CI51 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC15.18■□□□□ 0.02
Pdlim5Q8CI51 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC15.18■□□□□ 0.02
Pdlim5Q8CI51 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pdlim5Q8CI51 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pdlim5Q8CI51 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Pdlim5Q8CI51 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pdlim5Q8CI51 Gm6190-201ENSMUST00000220683 1374 ntBASIC15.18■□□□□ 0.02
Pdlim5Q8CI51 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Pdlim5Q8CI51 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pdlim5Q8CI51 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pdlim5Q8CI51 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pdlim5Q8CI51 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Pdlim5Q8CI51 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pdlim5Q8CI51 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pdlim5Q8CI51 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pdlim5Q8CI51 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC15.18■□□□□ 0.02
Pdlim5Q8CI51 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pdlim5Q8CI51 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Pdlim5Q8CI51 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pdlim5Q8CI51 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Pdlim5Q8CI51 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pdlim5Q8CI51 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pdlim5Q8CI51 AC153526.5-201ENSMUST00000218661 2147 ntBASIC15.17■□□□□ 0.02
Pdlim5Q8CI51 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pdlim5Q8CI51 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pdlim5Q8CI51 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pdlim5Q8CI51 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pdlim5Q8CI51 Gm13186-201ENSMUST00000118031 316 ntBASIC15.17■□□□□ 0.02
Pdlim5Q8CI51 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC15.17■□□□□ 0.02
Pdlim5Q8CI51 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pdlim5Q8CI51 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pdlim5Q8CI51 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pdlim5Q8CI51 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Pdlim5Q8CI51 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
Pdlim5Q8CI51 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pdlim5Q8CI51 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pdlim5Q8CI51 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pdlim5Q8CI51 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pdlim5Q8CI51 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC15.17■□□□□ 0.02
Pdlim5Q8CI51 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pdlim5Q8CI51 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pdlim5Q8CI51 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pdlim5Q8CI51 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pdlim5Q8CI51 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pdlim5Q8CI51 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Pdlim5Q8CI51 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Pdlim5Q8CI51 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pdlim5Q8CI51 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pdlim5Q8CI51 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC15.16■□□□□ 0.02
Pdlim5Q8CI51 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC15.16■□□□□ 0.02
Pdlim5Q8CI51 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pdlim5Q8CI51 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pdlim5Q8CI51 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pdlim5Q8CI51 Gm5417-201ENSMUST00000079706 384 ntBASIC15.16■□□□□ 0.02
Pdlim5Q8CI51 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pdlim5Q8CI51 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pdlim5Q8CI51 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pdlim5Q8CI51 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Pdlim5Q8CI51 Gm43072-201ENSMUST00000200283 1671 ntBASIC15.16■□□□□ 0.02
Pdlim5Q8CI51 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pdlim5Q8CI51 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Pdlim5Q8CI51 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pdlim5Q8CI51 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pdlim5Q8CI51 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pdlim5Q8CI51 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pdlim5Q8CI51 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pdlim5Q8CI51 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pdlim5Q8CI51 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Pdlim5Q8CI51 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pdlim5Q8CI51 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pdlim5Q8CI51 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pdlim5Q8CI51 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
Pdlim5Q8CI51 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC15.15■□□□□ 0.02
Pdlim5Q8CI51 Gm11539-201ENSMUST00000119837 557 ntBASIC15.15■□□□□ 0.02
Pdlim5Q8CI51 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pdlim5Q8CI51 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 76.9 ms