Protein–RNA interactions for Protein: Q8CI04

Cog3, Conserved oligomeric Golgi complex subunit 3, mousemouse

Predictions only

Length 820 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cog3Q8CI04 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Cog3Q8CI04 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cog3Q8CI04 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cog3Q8CI04 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Cog3Q8CI04 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cog3Q8CI04 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.62■□□□□ 0.41
Cog3Q8CI04 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cog3Q8CI04 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cog3Q8CI04 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cog3Q8CI04 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cog3Q8CI04 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cog3Q8CI04 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC17.62■□□□□ 0.41
Cog3Q8CI04 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cog3Q8CI04 Slc35b2-202ENSMUST00000223987 1766 ntBASIC17.62■□□□□ 0.41
Cog3Q8CI04 AC130713.1-201ENSMUST00000228853 1096 ntBASIC17.62■□□□□ 0.41
Cog3Q8CI04 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cog3Q8CI04 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cog3Q8CI04 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cog3Q8CI04 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cog3Q8CI04 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cog3Q8CI04 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Cog3Q8CI04 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Cog3Q8CI04 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cog3Q8CI04 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Cog3Q8CI04 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cog3Q8CI04 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cog3Q8CI04 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cog3Q8CI04 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cog3Q8CI04 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cog3Q8CI04 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Cog3Q8CI04 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cog3Q8CI04 Gm14859-201ENSMUST00000117752 357 ntBASIC17.61■□□□□ 0.41
Cog3Q8CI04 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cog3Q8CI04 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cog3Q8CI04 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Cog3Q8CI04 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cog3Q8CI04 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cog3Q8CI04 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cog3Q8CI04 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cog3Q8CI04 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cog3Q8CI04 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cog3Q8CI04 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cog3Q8CI04 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cog3Q8CI04 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Cog3Q8CI04 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cog3Q8CI04 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cog3Q8CI04 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cog3Q8CI04 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cog3Q8CI04 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cog3Q8CI04 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cog3Q8CI04 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cog3Q8CI04 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cog3Q8CI04 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.6■□□□□ 0.41
Cog3Q8CI04 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cog3Q8CI04 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cog3Q8CI04 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cog3Q8CI04 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cog3Q8CI04 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Cog3Q8CI04 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Cog3Q8CI04 Gm15442-201ENSMUST00000117905 1527 ntBASIC17.6■□□□□ 0.41
Cog3Q8CI04 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cog3Q8CI04 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cog3Q8CI04 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.6■□□□□ 0.41
Cog3Q8CI04 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cog3Q8CI04 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cog3Q8CI04 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Cog3Q8CI04 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cog3Q8CI04 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cog3Q8CI04 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cog3Q8CI04 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cog3Q8CI04 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cog3Q8CI04 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.59■□□□□ 0.41
Cog3Q8CI04 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cog3Q8CI04 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC17.59■□□□□ 0.41
Cog3Q8CI04 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC17.59■□□□□ 0.41
Cog3Q8CI04 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cog3Q8CI04 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC17.59■□□□□ 0.41
Cog3Q8CI04 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cog3Q8CI04 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Cog3Q8CI04 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cog3Q8CI04 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cog3Q8CI04 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cog3Q8CI04 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cog3Q8CI04 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC17.58■□□□□ 0.41
Cog3Q8CI04 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC17.58■□□□□ 0.41
Cog3Q8CI04 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC17.58■□□□□ 0.41
Cog3Q8CI04 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Cog3Q8CI04 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cog3Q8CI04 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cog3Q8CI04 Gm15794-201ENSMUST00000120182 631 ntBASIC17.58■□□□□ 0.4
Cog3Q8CI04 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC17.58■□□□□ 0.4
Cog3Q8CI04 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Cog3Q8CI04 Gm27742-201ENSMUST00000184667 60 ntBASIC17.58■□□□□ 0.4
Cog3Q8CI04 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC17.58■□□□□ 0.4
Cog3Q8CI04 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cog3Q8CI04 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cog3Q8CI04 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cog3Q8CI04 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Cog3Q8CI04 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cog3Q8CI04 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.58■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms