Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC14.72□□□□□ -0.05
ShfQ8CG80 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
ShfQ8CG80 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC14.72□□□□□ -0.05
ShfQ8CG80 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
ShfQ8CG80 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
ShfQ8CG80 Gm18115-201ENSMUST00000221209 621 ntBASIC14.72□□□□□ -0.05
ShfQ8CG80 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
ShfQ8CG80 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ShfQ8CG80 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
ShfQ8CG80 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
ShfQ8CG80 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ShfQ8CG80 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
ShfQ8CG80 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
ShfQ8CG80 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC14.71□□□□□ -0.05
ShfQ8CG80 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
ShfQ8CG80 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
ShfQ8CG80 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
ShfQ8CG80 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
ShfQ8CG80 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
ShfQ8CG80 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC14.71□□□□□ -0.05
ShfQ8CG80 Gm19430-201ENSMUST00000193847 2137 ntBASIC14.71□□□□□ -0.05
ShfQ8CG80 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
ShfQ8CG80 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
ShfQ8CG80 Gm13168-201ENSMUST00000121771 632 ntBASIC14.71□□□□□ -0.05
ShfQ8CG80 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
ShfQ8CG80 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
ShfQ8CG80 Gm21814-202ENSMUST00000203277 873 ntBASIC14.71□□□□□ -0.05
ShfQ8CG80 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC14.71□□□□□ -0.05
ShfQ8CG80 CT025689.6-201ENSMUST00000224991 1104 ntBASIC14.71□□□□□ -0.05
ShfQ8CG80 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC14.71□□□□□ -0.05
ShfQ8CG80 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
ShfQ8CG80 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC14.71□□□□□ -0.05
ShfQ8CG80 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
ShfQ8CG80 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
ShfQ8CG80 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC14.71□□□□□ -0.05
ShfQ8CG80 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
ShfQ8CG80 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
ShfQ8CG80 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
ShfQ8CG80 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
ShfQ8CG80 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC14.7□□□□□ -0.06
ShfQ8CG80 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ShfQ8CG80 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
ShfQ8CG80 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ShfQ8CG80 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
ShfQ8CG80 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
ShfQ8CG80 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
ShfQ8CG80 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
ShfQ8CG80 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
ShfQ8CG80 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ShfQ8CG80 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
ShfQ8CG80 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
ShfQ8CG80 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
ShfQ8CG80 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ShfQ8CG80 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ShfQ8CG80 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ShfQ8CG80 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
ShfQ8CG80 Gm715-201ENSMUST00000117865 831 ntBASIC14.7□□□□□ -0.06
ShfQ8CG80 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ShfQ8CG80 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ShfQ8CG80 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
ShfQ8CG80 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ShfQ8CG80 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC14.7□□□□□ -0.06
ShfQ8CG80 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC14.7□□□□□ -0.06
ShfQ8CG80 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
ShfQ8CG80 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ShfQ8CG80 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
ShfQ8CG80 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
ShfQ8CG80 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
ShfQ8CG80 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ShfQ8CG80 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ShfQ8CG80 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ShfQ8CG80 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
ShfQ8CG80 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
ShfQ8CG80 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ShfQ8CG80 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ShfQ8CG80 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ShfQ8CG80 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ShfQ8CG80 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ShfQ8CG80 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
ShfQ8CG80 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ShfQ8CG80 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
ShfQ8CG80 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC14.69□□□□□ -0.06
ShfQ8CG80 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ShfQ8CG80 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ShfQ8CG80 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
ShfQ8CG80 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC14.69□□□□□ -0.06
ShfQ8CG80 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
ShfQ8CG80 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC14.69□□□□□ -0.06
ShfQ8CG80 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC14.69□□□□□ -0.06
ShfQ8CG80 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC14.69□□□□□ -0.06
ShfQ8CG80 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
ShfQ8CG80 Gm27463-201ENSMUST00000183569 57 ntBASIC14.69□□□□□ -0.06
ShfQ8CG80 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC14.69□□□□□ -0.06
ShfQ8CG80 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC14.69□□□□□ -0.06
ShfQ8CG80 Arhgef4-208ENSMUST00000211073 171 ntBASIC14.69□□□□□ -0.06
ShfQ8CG80 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ShfQ8CG80 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ShfQ8CG80 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ShfQ8CG80 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
ShfQ8CG80 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC14.69□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms