Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Smc4Q8CG47 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Smc4Q8CG47 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Smc4Q8CG47 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Smc4Q8CG47 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Smc4Q8CG47 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Smc4Q8CG47 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC20.31■□□□□ 0.84
Smc4Q8CG47 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Smc4Q8CG47 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Smc4Q8CG47 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Smc4Q8CG47 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Smc4Q8CG47 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Smc4Q8CG47 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Smc4Q8CG47 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Smc4Q8CG47 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Smc4Q8CG47 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Smc4Q8CG47 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Smc4Q8CG47 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Smc4Q8CG47 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Smc4Q8CG47 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Smc4Q8CG47 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Smc4Q8CG47 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Smc4Q8CG47 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC20.3■□□□□ 0.84
Smc4Q8CG47 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC20.3■□□□□ 0.84
Smc4Q8CG47 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC20.3■□□□□ 0.84
Smc4Q8CG47 AC108846.1-201ENSMUST00000214531 513 ntBASIC20.3■□□□□ 0.84
Smc4Q8CG47 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Smc4Q8CG47 Birc2-201ENSMUST00000054878 378 ntBASIC20.3■□□□□ 0.84
Smc4Q8CG47 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Smc4Q8CG47 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Smc4Q8CG47 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Smc4Q8CG47 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Smc4Q8CG47 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Smc4Q8CG47 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Smc4Q8CG47 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Smc4Q8CG47 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Smc4Q8CG47 Gm24589-201ENSMUST00000116692 94 ntBASIC20.29■□□□□ 0.84
Smc4Q8CG47 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Smc4Q8CG47 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC20.29■□□□□ 0.84
Smc4Q8CG47 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Smc4Q8CG47 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Smc4Q8CG47 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Smc4Q8CG47 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Smc4Q8CG47 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Smc4Q8CG47 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Smc4Q8CG47 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Smc4Q8CG47 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smc4Q8CG47 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC20.28■□□□□ 0.84
Smc4Q8CG47 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smc4Q8CG47 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC20.28■□□□□ 0.84
Smc4Q8CG47 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smc4Q8CG47 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Smc4Q8CG47 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Smc4Q8CG47 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Smc4Q8CG47 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smc4Q8CG47 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smc4Q8CG47 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smc4Q8CG47 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smc4Q8CG47 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smc4Q8CG47 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smc4Q8CG47 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smc4Q8CG47 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smc4Q8CG47 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smc4Q8CG47 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smc4Q8CG47 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC20.28■□□□□ 0.84
Smc4Q8CG47 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Smc4Q8CG47 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Smc4Q8CG47 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Smc4Q8CG47 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Smc4Q8CG47 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Smc4Q8CG47 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Smc4Q8CG47 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Smc4Q8CG47 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC20.27■□□□□ 0.84
Smc4Q8CG47 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Smc4Q8CG47 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC20.27■□□□□ 0.84
Smc4Q8CG47 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC20.27■□□□□ 0.84
Smc4Q8CG47 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC20.27■□□□□ 0.84
Smc4Q8CG47 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC20.27■□□□□ 0.84
Smc4Q8CG47 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Smc4Q8CG47 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Smc4Q8CG47 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Smc4Q8CG47 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Smc4Q8CG47 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Smc4Q8CG47 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Smc4Q8CG47 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
Smc4Q8CG47 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Smc4Q8CG47 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Smc4Q8CG47 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Smc4Q8CG47 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smc4Q8CG47 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Smc4Q8CG47 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Smc4Q8CG47 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smc4Q8CG47 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC20.26■□□□□ 0.83
Smc4Q8CG47 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC20.26■□□□□ 0.83
Smc4Q8CG47 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC20.26■□□□□ 0.83
Smc4Q8CG47 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Smc4Q8CG47 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smc4Q8CG47 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smc4Q8CG47 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Smc4Q8CG47 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms