Protein–RNA interactions for Protein: Q8C8C1

Rtp1, Receptor-transporting protein 1, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp1Q8C8C1 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rtp1Q8C8C1 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rtp1Q8C8C1 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rtp1Q8C8C1 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rtp1Q8C8C1 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rtp1Q8C8C1 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rtp1Q8C8C1 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rtp1Q8C8C1 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rtp1Q8C8C1 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Rtp1Q8C8C1 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rtp1Q8C8C1 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Rtp1Q8C8C1 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rtp1Q8C8C1 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Rtp1Q8C8C1 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rtp1Q8C8C1 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rtp1Q8C8C1 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Rtp1Q8C8C1 Gm11780-201ENSMUST00000136880 516 ntBASIC18.77■□□□□ 0.6
Rtp1Q8C8C1 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
Rtp1Q8C8C1 Mir3113-201ENSMUST00000175478 76 ntBASIC18.77■□□□□ 0.6
Rtp1Q8C8C1 Chchd1-203ENSMUST00000224633 557 ntBASIC18.77■□□□□ 0.6
Rtp1Q8C8C1 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Rtp1Q8C8C1 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rtp1Q8C8C1 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rtp1Q8C8C1 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rtp1Q8C8C1 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
Rtp1Q8C8C1 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Rtp1Q8C8C1 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Rtp1Q8C8C1 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Rtp1Q8C8C1 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Rtp1Q8C8C1 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Rtp1Q8C8C1 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rtp1Q8C8C1 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rtp1Q8C8C1 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Rtp1Q8C8C1 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rtp1Q8C8C1 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rtp1Q8C8C1 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Rtp1Q8C8C1 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Rtp1Q8C8C1 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
Rtp1Q8C8C1 Gm4913-201ENSMUST00000117075 1290 ntBASIC18.76■□□□□ 0.59
Rtp1Q8C8C1 H2af-ps-201ENSMUST00000119066 295 ntBASIC18.76■□□□□ 0.59
Rtp1Q8C8C1 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Rtp1Q8C8C1 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC18.76■□□□□ 0.59
Rtp1Q8C8C1 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Rtp1Q8C8C1 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
Rtp1Q8C8C1 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC18.76■□□□□ 0.59
Rtp1Q8C8C1 AC084391.1-201ENSMUST00000200651 141 ntBASIC18.76■□□□□ 0.59
Rtp1Q8C8C1 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC18.76■□□□□ 0.59
Rtp1Q8C8C1 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rtp1Q8C8C1 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rtp1Q8C8C1 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rtp1Q8C8C1 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Rtp1Q8C8C1 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rtp1Q8C8C1 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Rtp1Q8C8C1 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Rtp1Q8C8C1 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rtp1Q8C8C1 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rtp1Q8C8C1 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Rtp1Q8C8C1 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rtp1Q8C8C1 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rtp1Q8C8C1 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Rtp1Q8C8C1 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rtp1Q8C8C1 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Rtp1Q8C8C1 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC18.75■□□□□ 0.59
Rtp1Q8C8C1 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Rtp1Q8C8C1 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC18.75■□□□□ 0.59
Rtp1Q8C8C1 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rtp1Q8C8C1 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rtp1Q8C8C1 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Rtp1Q8C8C1 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC18.75■□□□□ 0.59
Rtp1Q8C8C1 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Rtp1Q8C8C1 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC18.75■□□□□ 0.59
Rtp1Q8C8C1 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rtp1Q8C8C1 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Rtp1Q8C8C1 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rtp1Q8C8C1 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rtp1Q8C8C1 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC18.74■□□□□ 0.59
Rtp1Q8C8C1 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Rtp1Q8C8C1 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rtp1Q8C8C1 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rtp1Q8C8C1 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC18.74■□□□□ 0.59
Rtp1Q8C8C1 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rtp1Q8C8C1 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rtp1Q8C8C1 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rtp1Q8C8C1 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rtp1Q8C8C1 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rtp1Q8C8C1 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Rtp1Q8C8C1 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rtp1Q8C8C1 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rtp1Q8C8C1 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rtp1Q8C8C1 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Rtp1Q8C8C1 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rtp1Q8C8C1 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Rtp1Q8C8C1 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rtp1Q8C8C1 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rtp1Q8C8C1 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rtp1Q8C8C1 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Rtp1Q8C8C1 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rtp1Q8C8C1 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rtp1Q8C8C1 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rtp1Q8C8C1 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms