Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Alx1Q8C8B0 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Alx1Q8C8B0 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Alx1Q8C8B0 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC19.23■□□□□ 0.67
Alx1Q8C8B0 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Alx1Q8C8B0 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Alx1Q8C8B0 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Alx1Q8C8B0 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Alx1Q8C8B0 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Alx1Q8C8B0 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Alx1Q8C8B0 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Alx1Q8C8B0 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Alx1Q8C8B0 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Alx1Q8C8B0 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Alx1Q8C8B0 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Alx1Q8C8B0 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Alx1Q8C8B0 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Alx1Q8C8B0 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Alx1Q8C8B0 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Alx1Q8C8B0 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Alx1Q8C8B0 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC19.23■□□□□ 0.67
Alx1Q8C8B0 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Alx1Q8C8B0 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Alx1Q8C8B0 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
Alx1Q8C8B0 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Alx1Q8C8B0 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Alx1Q8C8B0 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Alx1Q8C8B0 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Alx1Q8C8B0 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Alx1Q8C8B0 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Alx1Q8C8B0 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
Alx1Q8C8B0 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC19.22■□□□□ 0.67
Alx1Q8C8B0 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC19.22■□□□□ 0.67
Alx1Q8C8B0 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Alx1Q8C8B0 Gm10819-201ENSMUST00000099988 561 ntBASIC19.22■□□□□ 0.67
Alx1Q8C8B0 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Alx1Q8C8B0 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Alx1Q8C8B0 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
Alx1Q8C8B0 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Alx1Q8C8B0 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Alx1Q8C8B0 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Alx1Q8C8B0 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Alx1Q8C8B0 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Alx1Q8C8B0 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Alx1Q8C8B0 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Alx1Q8C8B0 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC19.21■□□□□ 0.67
Alx1Q8C8B0 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Alx1Q8C8B0 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Alx1Q8C8B0 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Alx1Q8C8B0 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC19.21■□□□□ 0.67
Alx1Q8C8B0 Gm18669-201ENSMUST00000216049 778 ntBASIC19.21■□□□□ 0.67
Alx1Q8C8B0 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Alx1Q8C8B0 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Alx1Q8C8B0 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Alx1Q8C8B0 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Alx1Q8C8B0 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Alx1Q8C8B0 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Alx1Q8C8B0 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Alx1Q8C8B0 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Alx1Q8C8B0 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Alx1Q8C8B0 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Alx1Q8C8B0 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Alx1Q8C8B0 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Alx1Q8C8B0 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Alx1Q8C8B0 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Alx1Q8C8B0 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC19.2■□□□□ 0.66
Alx1Q8C8B0 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Alx1Q8C8B0 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Alx1Q8C8B0 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Alx1Q8C8B0 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Alx1Q8C8B0 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
Alx1Q8C8B0 Gm10461-201ENSMUST00000202073 4786 ntBASIC19.2■□□□□ 0.66
Alx1Q8C8B0 AC115863.1-201ENSMUST00000214815 1813 ntBASIC19.2■□□□□ 0.66
Alx1Q8C8B0 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Alx1Q8C8B0 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Alx1Q8C8B0 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Alx1Q8C8B0 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Alx1Q8C8B0 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Alx1Q8C8B0 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Alx1Q8C8B0 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC19.2■□□□□ 0.66
Alx1Q8C8B0 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Alx1Q8C8B0 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Alx1Q8C8B0 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Alx1Q8C8B0 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Alx1Q8C8B0 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Alx1Q8C8B0 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Alx1Q8C8B0 Gm28033-201ENSMUST00000184224 96 ntBASIC19.19■□□□□ 0.66
Alx1Q8C8B0 AC114585.2-202ENSMUST00000228094 426 ntBASIC19.19■□□□□ 0.66
Alx1Q8C8B0 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Alx1Q8C8B0 AC132265.1-201ENSMUST00000219233 1665 ntBASIC19.19■□□□□ 0.66
Alx1Q8C8B0 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Alx1Q8C8B0 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Alx1Q8C8B0 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Alx1Q8C8B0 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Alx1Q8C8B0 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Alx1Q8C8B0 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Alx1Q8C8B0 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Alx1Q8C8B0 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Alx1Q8C8B0 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Alx1Q8C8B0 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms