Protein–RNA interactions for Protein: Q8C6M1

Usp20, Ubiquitin carboxyl-terminal hydrolase 20, mousemouse

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp20Q8C6M1 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Usp20Q8C6M1 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Usp20Q8C6M1 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Usp20Q8C6M1 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Usp20Q8C6M1 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Usp20Q8C6M1 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC18.21■□□□□ 0.51
Usp20Q8C6M1 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Usp20Q8C6M1 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Usp20Q8C6M1 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Usp20Q8C6M1 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Usp20Q8C6M1 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Usp20Q8C6M1 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Usp20Q8C6M1 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
Usp20Q8C6M1 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Usp20Q8C6M1 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Usp20Q8C6M1 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Usp20Q8C6M1 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Usp20Q8C6M1 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Usp20Q8C6M1 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Usp20Q8C6M1 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC18.2■□□□□ 0.5
Usp20Q8C6M1 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Usp20Q8C6M1 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC18.2■□□□□ 0.5
Usp20Q8C6M1 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Usp20Q8C6M1 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Usp20Q8C6M1 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Usp20Q8C6M1 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Usp20Q8C6M1 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Usp20Q8C6M1 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Usp20Q8C6M1 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Usp20Q8C6M1 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Usp20Q8C6M1 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Usp20Q8C6M1 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC18.19■□□□□ 0.5
Usp20Q8C6M1 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Usp20Q8C6M1 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Usp20Q8C6M1 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Usp20Q8C6M1 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Usp20Q8C6M1 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Usp20Q8C6M1 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC18.19■□□□□ 0.5
Usp20Q8C6M1 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Usp20Q8C6M1 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Usp20Q8C6M1 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Usp20Q8C6M1 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC18.19■□□□□ 0.5
Usp20Q8C6M1 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Usp20Q8C6M1 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Usp20Q8C6M1 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Usp20Q8C6M1 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Usp20Q8C6M1 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Usp20Q8C6M1 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Usp20Q8C6M1 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Usp20Q8C6M1 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Usp20Q8C6M1 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Usp20Q8C6M1 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Usp20Q8C6M1 Gm42918-201ENSMUST00000199249 1580 ntBASIC18.18■□□□□ 0.5
Usp20Q8C6M1 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Usp20Q8C6M1 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Usp20Q8C6M1 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Usp20Q8C6M1 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Usp20Q8C6M1 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC18.18■□□□□ 0.5
Usp20Q8C6M1 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC18.18■□□□□ 0.5
Usp20Q8C6M1 Cmtm5-203ENSMUST00000227441 610 ntBASIC18.18■□□□□ 0.5
Usp20Q8C6M1 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Usp20Q8C6M1 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Usp20Q8C6M1 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Usp20Q8C6M1 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Usp20Q8C6M1 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Usp20Q8C6M1 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Usp20Q8C6M1 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Usp20Q8C6M1 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Usp20Q8C6M1 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Usp20Q8C6M1 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Usp20Q8C6M1 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Usp20Q8C6M1 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Usp20Q8C6M1 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Usp20Q8C6M1 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC18.17■□□□□ 0.5
Usp20Q8C6M1 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Usp20Q8C6M1 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
Usp20Q8C6M1 Gm12644-201ENSMUST00000119935 606 ntBASIC18.17■□□□□ 0.5
Usp20Q8C6M1 Gm10052-201ENSMUST00000168019 960 ntBASIC18.17■□□□□ 0.5
Usp20Q8C6M1 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Usp20Q8C6M1 Gm27867-201ENSMUST00000184778 125 ntBASIC18.17■□□□□ 0.5
Usp20Q8C6M1 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Usp20Q8C6M1 AC108846.1-201ENSMUST00000214531 513 ntBASIC18.17■□□□□ 0.5
Usp20Q8C6M1 AC159301.1-201ENSMUST00000225130 1182 ntBASIC18.17■□□□□ 0.5
Usp20Q8C6M1 Gm7729-201ENSMUST00000050143 801 ntBASIC18.17■□□□□ 0.5
Usp20Q8C6M1 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Usp20Q8C6M1 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC18.17■□□□□ 0.5
Usp20Q8C6M1 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Usp20Q8C6M1 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Usp20Q8C6M1 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC18.17■□□□□ 0.5
Usp20Q8C6M1 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Usp20Q8C6M1 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Usp20Q8C6M1 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Usp20Q8C6M1 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Usp20Q8C6M1 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Usp20Q8C6M1 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.16■□□□□ 0.5
Usp20Q8C6M1 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Usp20Q8C6M1 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC18.16■□□□□ 0.5
Usp20Q8C6M1 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Usp20Q8C6M1 Gm15372-201ENSMUST00000120729 834 ntBASIC18.16■□□□□ 0.5
Usp20Q8C6M1 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms